RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Tcf19Q99KJ5 263 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Etv5Q9CXC9 510 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 SrpraQ9DBG7 636 aaKnown RBP10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Prmt1Q9JIF0 371 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Cep290Q6A078 2472 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Zfp282E9PVC2 666 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Adamts3E9Q287 1204 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 KeraO35367 351 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Cep76Q0VEJ0 659 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ugt2b36Q3UEP4 530 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Sdc3Q64519 442 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Plekhm3Q8BM47 761 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Cnot2Q8C5L3 540 aaKnown RBP10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Vmn1r32Q8R2D9 302 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Cops8Q8VBV7 209 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Oosp1Q925U0 202 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Q9D112 206 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Klhdc8bQ9D2D9 354 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Fank1Q9DAM9 344 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Chrm3Q9ERZ3 589 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Gm28897A0A087WP44 222 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Gm4924A0A1B0GR71 966 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Vmn2r113E9PZA6 856 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Zfp989H3BLB0 661 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr1425K7N659 312 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Rras2P62071 204 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr1322Q7TQW3 310 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Pcdh8Q7TSK3 1070 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Spag1Q80ZX8 901 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Derl2Q8BNI4 239 aaKnown RBP10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Adgrg3Q8R0T6 542 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Clstn3Q99JH7 956 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Q9D8N1 392 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Dock11A2AF47 2073 aa10.75□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr485A0A140LJF5 317 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Cela3aA2A9U8 283 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr519K7N645 319 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Prdx4O08807 274 aaKnown RBP10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Gcm2O09102 504 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Nr4a1P12813 601 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Dcst1Q059Y8 732 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Rab42Q0PD08 215 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Fezf1Q0VDQ9 475 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 E330014E10RikQ3UL33 481 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Lingo2Q3URE9 606 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 D5Ertd577eQ499F0 481 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Pwwp2aQ69Z61 730 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ing4Q8C0D7 249 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Unc5dQ8K1S2 956 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tor2aQ8R1J9 321 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr643Q8VGY1 314 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Rnf32Q9JIT1 368 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Bmp10Q9R229 421 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Skint2A7XUX6 400 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Prr36E9PV26 1098 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Vmn2r9K7N6Z8 848 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Brd7O88665 651 aaKnown RBP10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tgfb3P17125 410 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Wnt3P17553 355 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Slc26a1P58735 704 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Trappc13Q3TIR1 417 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Pdp1Q3UV70 538 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Sez6l2Q4V9Z5 910 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ltbp3Q61810 1268 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tvp23aQ6NVH0 222 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Fgl1Q71KU9 314 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 RhdQ8CF94 418 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Itfg2Q91WI7 443 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ankrd7Q9D504 279 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Brca1P48754 1812 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Fam217bA2AJW5 387 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Slc25a25A2ASZ8 469 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Akirin2B1AXD8 201 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 OgdhlE9Q7L0 1029 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Stard6P59096 233 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr684Q7TRN8 312 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Gen1Q8BMI4 908 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Sall4Q8BX22 1067 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 EloaQ8CB77 773 aaKnown RBP10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Cnppd1Q8K158 407 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 McatQ8R3F5 381 aaKnown RBP10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr308Q8VFP2 308 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Fam122cQ9D5J5 180 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 TescQ9JKL5 214 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Spata31d1cE9QAF1 853 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Gm9493F6SVV1 192 aaKnown RBP10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Rdh5O55240 318 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Pdlim3O70209 316 aaKnown RBP10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 DbiP31786 87 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Gpr143P70259 405 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Spryd7Q3TFQ1 196 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Slc17a4Q5NCM1 492 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Smad2Q62432 467 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Pum2Q80U58 1066 aaKnown RBP10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Adam4Q8CGQ2 763 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 D8Ertd738eQ8R1F0 94 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Gabarapl1Q8R3R8 117 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tpra1Q99MU1 369 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 5530401A14RikQ9D3H9 131 aa10.74□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Clca3a2Q9EQR4 902 aa10.74□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 63.6 ms