RNA–Protein interactions for RNA: ENST00000642089.1

SAMMSON-226, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,582 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-226ENST00000642089 TRGV8A0A0C4DH27 118 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 TMEM200CA6NKL6 621 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 FAM166BA8MTA8 275 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 A8MVJ9 347 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 PDLIM1O00151 329 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 RGS16O15492 202 aaPredicted RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 LRRTM2O43300 516 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 PEX1O43933 1283 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 NME2P1O60361 137 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 CDC40O60508 579 aaKnown RBP eCLIP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 ZNF354AO60765 605 aaPredicted RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 PDE9AO76083 593 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 SEMA3DO95025 777 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 ENO1P06733 434 aaKnown RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 CHRNGP07510 517 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 ANXA4P09525 319 aaPredicted RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 CT62P0C5K7 136 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 LINC00032P0C843 101 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 CPMP14384 443 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 ALDH3A1P30838 453 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 SOX18P35713 384 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 MEOX1P50221 254 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 NR0B1P51843 470 aaKnown RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 PKNOX1P55347 436 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 SESN3P58005 492 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 RAE1P78406 368 aaKnown RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 IGLV3-21P80748 117 aaPredicted RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 MRPS35P82673 323 aaKnown RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 ALDH6A1Q02252 535 aaKnown RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 DUSP2Q05923 314 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 SLC18A2Q05940 514 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 CSTF3Q12996 717 aaKnown RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 EXOSC7Q15024 291 aaKnown RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 LTB4RQ15722 352 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 GALNTL6Q49A17 601 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 HSP90B2PQ58FF3 399 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 WIPI1Q5MNZ9 446 aaPredicted RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 C6orf163Q5TEZ5 329 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 LIPMQ5VYY2 423 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 SLC25A25Q6KCM7 469 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 FAM111BQ6SJ93 734 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 C3P1Q6ZMU1 363 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 RNF111Q6ZNA4 994 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 MAMDC2Q7Z304 686 aaPredicted RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 YTHDF3Q7Z739 585 aaKnown RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 FJX1Q86VR8 437 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 C9orf40Q8IXQ3 194 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 DDIASQ8IXT1 998 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 PRR22Q8IZ63 422 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 ST13P4Q8IZP2 240 aaPredicted RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 HORMAD2Q8N7B1 307 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 TMEM178AQ8NBL3 297 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 FAM13CQ8NE31 585 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 BVESQ8NE79 360 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 OR4K14Q8NGD5 310 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 RDH11Q8TC12 318 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 CHTF18Q8WVB6 975 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 NR4A3Q92570 626 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 HDAC2Q92769 488 aaKnown RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 DIO2Q92813 273 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 GFM2Q969S9 779 aaKnown RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 TM4SF18Q96CE8 201 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 PPP1R36Q96LQ0 422 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 RASL10BQ96S79 203 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 GATA5Q9BWX5 397 aaPredicted RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 BRF2Q9HAW0 419 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 KCNK9Q9NPC2 374 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 DEPPQ9NTK1 212 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 NMRK1Q9NWW6 199 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 HPF1Q9NWY4 346 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 MYOTQ9UBF9 498 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 HEY2Q9UBP5 337 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 SEC14L3Q9UDX4 400 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 GIMAP2Q9UG22 337 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 BCAP29Q9UHQ4 241 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 LGALS13Q9UHV8 139 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 ERRFI1Q9UJM3 462 aaPredicted RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 DLGAP4Q9Y2H0 992 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 STK38LQ9Y2H1 464 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 YARS2Q9Y2Z4 477 aaKnown RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 PLLPQ9Y342 182 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 POLR3HQ9Y535 204 aaPredicted RBP4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 PCDHA9Q9Y5H5 950 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 DOPEY2Q9Y3R5 2298 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 ESPL1Q14674 2120 aa4.53□□□□□ -1.68
SAMMSON-226ENST00000642089 ATP6AP2A0A1C7CYW4 349 aa4.53□□□□□ -1.69
SAMMSON-226ENST00000642089 C1orf226A1L170 272 aa4.53□□□□□ -1.69
SAMMSON-226ENST00000642089 PINLYPA6NC86 204 aa4.53□□□□□ -1.69
SAMMSON-226ENST00000642089 GOLGA6L10A6NI86 522 aa4.53□□□□□ -1.69
SAMMSON-226ENST00000642089 EBAG9O00559 213 aa4.53□□□□□ -1.69
SAMMSON-226ENST00000642089 TFECO14948 347 aaPredicted RBP4.53□□□□□ -1.69
SAMMSON-226ENST00000642089 AZIN1O14977 448 aa4.53□□□□□ -1.69
SAMMSON-226ENST00000642089 TBX1O43435 398 aa4.53□□□□□ -1.69
SAMMSON-226ENST00000642089 HS6ST1O60243 411 aa4.53□□□□□ -1.69
SAMMSON-226ENST00000642089 TRIM13O60858 407 aa4.53□□□□□ -1.69
SAMMSON-226ENST00000642089 SHOX2O60902 331 aaPredicted RBP4.53□□□□□ -1.69
SAMMSON-226ENST00000642089 GUCY1B2O75343 617 aa4.53□□□□□ -1.69
SAMMSON-226ENST00000642089 SEC22BO75396 215 aa4.53□□□□□ -1.69
SAMMSON-226ENST00000642089 SKAP2O75563 359 aaPredicted RBP4.53□□□□□ -1.69
SAMMSON-226ENST00000642089 LYPLA1O75608 230 aaPredicted RBP4.53□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms