RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 SLC35G5Q96KT7 338 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 RBM4BQ9BQ04 359 aaKnown RBP16.11■□□□□ 0.17
PHGDH-234ENST00000642041 RBM4Q9BWF3 364 aaKnown RBP16.11■□□□□ 0.17
PHGDH-234ENST00000642041 GLIPR2Q9H4G4 154 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 FANCEQ9HB96 536 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 BCL2L10Q9HD36 194 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 EXD2Q9NVH0 621 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 ORC6Q9Y5N6 252 aa16.11■□□□□ 0.17
PHGDH-234ENST00000642041 HYKKA2RU49 373 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 FITM1A5D6W6 292 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 ADAMDEC1O15204 470 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 ETS2P15036 469 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 PORP16435 677 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-234ENST00000642041 CDH2P19022 906 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-234ENST00000642041 GALNSP34059 522 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 CRISP3P54108 245 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 VSX2P58304 361 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-234ENST00000642041 FOLH1Q04609 750 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 GAB1Q13480 694 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 IFI44LQ53G44 452 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.1■□□□□ 0.17
PHGDH-234ENST00000642041 PRSS42Q7Z5A4 293 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 TRIM73Q86UV7 250 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 RNF130Q86XS8 419 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 ZNF595Q8IYB9 648 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 MARVELD2Q8N4S9 558 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 TEX19Q8NA77 164 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 BBS10Q8TAM1 723 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 NUDT8Q8WV74 236 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 NRTNQ99748 197 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 CXorf36Q9H7Y0 433 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 ZCCHC3Q9NUD5 404 aaKnown RBP16.1■□□□□ 0.17
PHGDH-234ENST00000642041 ENOPH1Q9UHY7 261 aa16.1■□□□□ 0.17
PHGDH-234ENST00000642041 IGHV1OR21-1A0A087WYE8 117 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 A0A0G2JPF8 293 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 SLC9B1P1A6NJY1 282 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 A8MVJ9 347 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 HNRNPCL2B2RXH8 293 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 HNRNPCL3B7ZW38 293 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 G3V2T6 193 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 H0YAE9 185 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 GPR75O95800 540 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 EIF2S1P05198 315 aaKnown RBP16.09■□□□□ 0.17
PHGDH-234ENST00000642041 HNRNPCL4P0DMR1 293 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 RNH1P13489 461 aaKnown RBP16.09■□□□□ 0.17
PHGDH-234ENST00000642041 ST6GAL1P15907 406 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 MATN1P21941 496 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 XKP51811 444 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 RAD23AP54725 363 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 SMIM11AP58511 58 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 HSPB3Q12988 150 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 LRRC36Q1X8D7 754 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 KRTAP21-3Q3LHN1 58 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 DEFB134Q4QY38 66 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 LRRC23Q53EV4 343 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-234ENST00000642041 ZDHHC21Q8IVQ6 265 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 SLITRK4Q8IW52 837 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 FAM20CQ8IXL6 584 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 ZNF675Q8TD23 568 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 APOBEC4Q8WW27 367 aaKnown RBP16.09■□□□□ 0.17
PHGDH-234ENST00000642041 GEMIN6Q8WXD5 167 aaKnown RBP16.09■□□□□ 0.17
PHGDH-234ENST00000642041 ZNF681Q96N22 645 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 MAPKAP1Q9BPZ7 522 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 TRIM8Q9BZR9 551 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 AICDAQ9GZX7 198 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 COQ10BQ9H8M1 238 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 USE1Q9NZ43 259 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 SCOCQ9UIL1 159 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 SERTAD3Q9UJW9 196 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 FAM32AQ9Y421 112 aaKnown RBP16.09■□□□□ 0.17
PHGDH-234ENST00000642041 MAP4K5Q9Y4K4 846 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 MN1Q10571 1320 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-234ENST00000642041 ADGRG4Q8IZF6 3080 aa16.09■□□□□ 0.17
PHGDH-234ENST00000642041 NUP214P35658 2090 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-234ENST00000642041 PRRC2CQ9Y520 2896 aaKnown RBP16.09■□□□□ 0.17
PHGDH-234ENST00000642041 NKX2-8O15522 239 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 ZNF682O95780 498 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 ATP1B1P05026 303 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 GUSBP08236 651 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 ZNF23P17027 643 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 ALDH4A1P30038 563 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 IFNA8P32881 189 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 ALDH3A2P51648 485 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 SERTAD2Q14140 314 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 ZSWIM7Q19AV6 140 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 CYBRD1Q53TN4 286 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 TTC23Q5W5X9 447 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 OR2T5Q6IEZ7 315 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 FRMPD2BQ6IN97 320 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 HMBOX1Q6NT76 420 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 FAM92BQ6ZTR7 304 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 ZNF551Q7Z340 670 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-234ENST00000642041 AMIGO2Q86SJ2 522 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 CYP4Z1Q86W10 505 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 GPR135Q8IZ08 494 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 LGI4Q8N135 537 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 OR2T29Q8NH02 315 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 NCSTNQ92542 709 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 ELP4Q96EB1 424 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 CNRIP1Q96F85 164 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms