RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 CXXC5Q7LFL8 322 aaKnown RBP6.84□□□□□ -1.31
PHGDH-225ENST00000641720 BIVMQ86UB2 503 aa6.84□□□□□ -1.31
PHGDH-225ENST00000641720 RIMKLAQ8IXN7 391 aa6.84□□□□□ -1.31
PHGDH-225ENST00000641720 TMEM132CQ8N3T6 1108 aa6.84□□□□□ -1.31
PHGDH-225ENST00000641720 ZNF321PQ8N8H1 164 aa6.84□□□□□ -1.31
PHGDH-225ENST00000641720 NFAM1Q8NET5 270 aaPredicted RBP6.84□□□□□ -1.31
PHGDH-225ENST00000641720 SPATA3Q8NHX4 192 aa6.84□□□□□ -1.31
PHGDH-225ENST00000641720 FAM57AQ8TBR7 257 aa6.84□□□□□ -1.31
PHGDH-225ENST00000641720 ACTRT2Q8TDY3 377 aa6.84□□□□□ -1.31
PHGDH-225ENST00000641720 PTPMT1Q8WUK0 201 aaPredicted RBP6.84□□□□□ -1.31
PHGDH-225ENST00000641720 TANKQ92844 425 aa6.84□□□□□ -1.31
PHGDH-225ENST00000641720 EXOSC8Q96B26 276 aaKnown RBP6.84□□□□□ -1.31
PHGDH-225ENST00000641720 PPWD1Q96BP3 646 aaKnown RBP6.84□□□□□ -1.31
PHGDH-225ENST00000641720 CNRIP1Q96F85 164 aaPredicted RBP6.84□□□□□ -1.31
PHGDH-225ENST00000641720 ZNF681Q96N22 645 aa6.84□□□□□ -1.31
PHGDH-225ENST00000641720 FAIM2Q9BWQ8 316 aa6.84□□□□□ -1.31
PHGDH-225ENST00000641720 TRIM45Q9H8W5 580 aaPredicted RBP6.84□□□□□ -1.31
PHGDH-225ENST00000641720 WDR41Q9HAD4 459 aa6.84□□□□□ -1.31
PHGDH-225ENST00000641720 KCNK13Q9HB14 408 aa6.84□□□□□ -1.31
PHGDH-225ENST00000641720 ADAP2Q9NPF8 381 aa6.84□□□□□ -1.31
PHGDH-225ENST00000641720 PFDN4Q9NQP4 134 aa6.84□□□□□ -1.31
PHGDH-225ENST00000641720 PNO1Q9NRX1 252 aaKnown RBP6.84□□□□□ -1.31
PHGDH-225ENST00000641720 AIG1Q9NVV5 245 aa6.84□□□□□ -1.31
PHGDH-225ENST00000641720 NOP53Q9NZM5 478 aaKnown RBP6.84□□□□□ -1.31
PHGDH-225ENST00000641720 C19orf25Q9UFG5 118 aaPredicted RBP6.84□□□□□ -1.31
PHGDH-225ENST00000641720 UTS2RQ9UKP6 389 aa6.84□□□□□ -1.31
PHGDH-225ENST00000641720 NPIPA1Q9UND3 350 aa6.84□□□□□ -1.31
PHGDH-225ENST00000641720 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.84□□□□□ -1.313e-11■□□□□ 8.5
PHGDH-225ENST00000641720 USF3Q68DE3 2245 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 SAGE2PA6NJ88 616 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 C17orf105B2RV13 164 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 E9PBE3 544 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 NME2P1O60361 137 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 GUCY1B2O75343 617 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 ERAL1O75616 437 aaKnown RBP6.83□□□□□ -1.32
PHGDH-225ENST00000641720 CLPSP04118 112 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 IFNA16P05015 189 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 EFNA1P20827 205 aaPredicted RBP6.83□□□□□ -1.32
PHGDH-225ENST00000641720 NME2P22392 152 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 PIK3R1P27986 724 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 MAPK1P28482 360 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 LSP1P33241 339 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 HPCAL1P37235 193 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 FEN1P39748 380 aaKnown RBP6.83□□□□□ -1.32
PHGDH-225ENST00000641720 GSTM5P46439 218 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 ASMTP46597 345 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 STT3AP46977 705 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 XKP51811 444 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 SEC24CP53992 1094 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 NME5P56597 212 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 SLC26A5P58743 744 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 GNGT1P63211 74 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 ALDH6A1Q02252 535 aaKnown RBP6.83□□□□□ -1.32
PHGDH-225ENST00000641720 C2orf80Q0P641 193 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 STX4Q12846 297 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 HEPACAMQ14CZ8 416 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 OR1C1Q15619 314 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 ELAVL1Q15717 326 aaKnown RBP6.83□□□□□ -1.32
PHGDH-225ENST00000641720 SMU1Q2TAY7 513 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 CMPK2Q5EBM0 449 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 ABHD17BQ5VST6 288 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 SPINK14Q6IE38 97 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 GALNTL5Q7Z4T8 443 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.83□□□□□ -1.32
PHGDH-225ENST00000641720 CD163Q86VB7 1156 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 CCDC71Q8IV32 467 aaPredicted RBP6.83□□□□□ -1.32
PHGDH-225ENST00000641720 ST13P4Q8IZP2 240 aaPredicted RBP6.83□□□□□ -1.32
PHGDH-225ENST00000641720 ARMC10Q8N2F6 343 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 GHDCQ8N2G8 530 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 KIF2BQ8N4N8 673 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 CPSF7Q8N684 471 aaKnown RBP6.83□□□□□ -1.32
PHGDH-225ENST00000641720 SIMC1Q8NDZ2 872 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 CHDHQ8NE62 594 aaPredicted RBP6.83□□□□□ -1.32
PHGDH-225ENST00000641720 OR7A2PQ8NGA2 310 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 OR4K14Q8NGD5 310 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 OR9A2Q8NGT5 310 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 SUN3Q8TAQ9 357 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 CA5BP1Q8WTZ4 195 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 CIDECQ96AQ7 238 aaPredicted RBP6.83□□□□□ -1.32
PHGDH-225ENST00000641720 CHMP6Q96FZ7 201 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 TEX37Q96LM6 180 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 LPAR4Q99677 370 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 ZNF559Q9BR84 538 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 TUBB6Q9BUF5 446 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 TMEM120AQ9BXJ8 343 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 ALOXE3Q9BYJ1 711 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 REEP4Q9H6H4 257 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 TCF7L2Q9NQB0 619 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 MIEF1Q9NQG6 463 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 STMN3Q9NZ72 180 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 EHD3Q9NZN3 535 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 ZNF223Q9UK11 482 aaPredicted RBP6.83□□□□□ -1.32
PHGDH-225ENST00000641720 EIF3LQ9Y262 564 aaKnown RBP6.83□□□□□ -1.32
PHGDH-225ENST00000641720 PLEKHA6Q9Y2H5 1048 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 GPR45Q9Y5Y3 372 aa6.83□□□□□ -1.32
PHGDH-225ENST00000641720 A0A0G2JND7 137 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 A0A1W2PPR1 153 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 FAM90A27PA6NNH2 459 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 MYO1GB0I1T2 1018 aa6.82□□□□□ -1.32
PHGDH-225ENST00000641720 UBDO15205 165 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms