RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 ZNF274Q96GC6 653 aaPredicted RBP6.75□□□□□ -1.33
NECAP1-220ENST00000639841 APOLD1Q96LR9 279 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 LMF2Q9BU23 707 aaKnown RBP6.75□□□□□ -1.33
NECAP1-220ENST00000639841 DUSP22Q9NRW4 184 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 SEMA4GQ9NTN9 838 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 ASIC5Q9NY37 505 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 CTSFQ9UBX1 484 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 WDR83OSQ9Y284 106 aa6.75□□□□□ -1.33
NECAP1-220ENST00000639841 RRHO14718 337 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 ECDO95905 644 aaPredicted RBP6.74□□□□□ -1.33
NECAP1-220ENST00000639841 SFTPBP07988 381 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 PRKAR1AP10644 381 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 ITGAMP11215 1152 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 CYP11B1P15538 503 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 MSR1P21757 451 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 DCTDP32321 178 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 RPL9P32969 192 aaKnown RBP6.74□□□□□ -1.33
NECAP1-220ENST00000639841 RPL21P46778 160 aaKnown RBP6.74□□□□□ -1.33
NECAP1-220ENST00000639841 MMP15P51511 669 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 MERTKQ12866 999 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 TMEM119Q4V9L6 283 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 BEX5Q5H9J7 111 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 MIIPQ5JXC2 388 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 SLC8B1Q6J4K2 584 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 SLC25A25Q6KCM7 469 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 UGT3A1Q6NUS8 523 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 METTL2BQ6P1Q9 378 aaKnown RBP6.74□□□□□ -1.33
NECAP1-220ENST00000639841 CDHR3Q6ZTQ4 885 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 KCTD8Q6ZWB6 473 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 BCDIN3DQ7Z5W3 292 aaKnown RBP6.74□□□□□ -1.33
NECAP1-220ENST00000639841 MAB21L3Q8N8X9 362 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 SMYD1Q8NB12 490 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 ZNF461Q8TAF7 563 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 ERMNQ8TAM6 284 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 CD300LFQ8TDQ1 290 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 GPX8Q8TED1 209 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 TMEM143Q96AN5 459 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 BOD1Q96IK1 185 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 METTL2AQ96IZ6 378 aaKnown RBP6.74□□□□□ -1.33
NECAP1-220ENST00000639841 MSTO1Q9BUK6 570 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 Q9H8V8 135 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 MLXIPLQ9NP71 852 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 ZDHHC18Q9NUE0 388 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 MBNL3Q9NUK0 354 aaKnown RBP6.74□□□□□ -1.33
NECAP1-220ENST00000639841 TMEM74BQ9NUR3 256 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 ERVK-18Q9QC07 812 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 OAZ3Q9UMX2 235 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 BZW2Q9Y6E2 419 aaKnown RBP6.74□□□□□ -1.33
NECAP1-220ENST00000639841 ACACBO00763 2458 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 COL4A2P08572 1712 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 EPG5Q9HCE0 2579 aa6.74□□□□□ -1.33
NECAP1-220ENST00000639841 NCOR2Q9Y618 2525 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 GREB1Q4ZG55 1949 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 TRAV24A0A0B4J272 114 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 A0A0J9YYE9 177 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 WDR27A2RRH5 827 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 CCL16O15467 120 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 DFFBO76075 338 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 TDP2O95551 362 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 TRBC1P01850 177 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 CRYGBP07316 175 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 HAPLN1P10915 354 aaPredicted RBP6.73□□□□□ -1.33
NECAP1-220ENST00000639841 UNGP13051 313 aaPredicted RBP6.73□□□□□ -1.33
NECAP1-220ENST00000639841 GOT1P17174 413 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 CHATP28329 748 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 SSTR1P30872 391 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 RORAP35398 523 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 NKX2-1P43699 371 aaPredicted RBP6.73□□□□□ -1.33
NECAP1-220ENST00000639841 CSNK2A1P68400 391 aaPredicted RBP6.73□□□□□ -1.33
NECAP1-220ENST00000639841 IRF8Q02556 426 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 PMPCAQ10713 525 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 DMP1Q13316 513 aaPredicted RBP6.73□□□□□ -1.33
NECAP1-220ENST00000639841 KYAT1Q16773 422 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 ZNF568Q3ZCX4 644 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 XKR7Q5GH72 579 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 LCN1P1Q5VSP4 162 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 CAPN13Q6MZZ7 669 aaPredicted RBP6.73□□□□□ -1.33
NECAP1-220ENST00000639841 MFSD6LQ8IWD5 586 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 FAM114A1Q8IWE2 563 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 GTPBP8Q8N3Z3 284 aaPredicted RBP6.73□□□□□ -1.33
NECAP1-220ENST00000639841 TXNDC5Q8NBS9 432 aaKnown RBP6.73□□□□□ -1.33
NECAP1-220ENST00000639841 CSNK2A3Q8NEV1 391 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 RAB1CQ92928 201 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 GLYATL1Q969I3 302 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 P2RY11Q96G91 374 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 CYTH2Q99418 400 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 KXD1Q9BQD3 176 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 ACBD6Q9BR61 282 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 ALOXE3Q9BYJ1 711 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 NXF3Q9H4D5 531 aaKnown RBP6.73□□□□□ -1.33
NECAP1-220ENST00000639841 TMEM165Q9HC07 324 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 DDX28Q9NUL7 540 aaKnown RBP6.73□□□□□ -1.33
NECAP1-220ENST00000639841 PKD2L2Q9NZM6 624 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 NPAP1Q9NZP6 1156 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 PIGLQ9Y2B2 252 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 TRIOO75962 3097 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 OR6C65A6NJZ3 312 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 SNTNA6NMZ2 147 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 TEX46H3BTG2 121 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 EIF3HO15372 352 aaKnown RBP eCLIP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms