RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 NFS1Q9Y697 457 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 TROQ12816 1431 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-209ENST00000639244 EIF1AYO14602 144 aaKnown RBP4.1□□□□□ -1.75
SCN3A-209ENST00000639244 ARPC3O15145 178 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 MSH4O15457 936 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 SEPT4O43236 478 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 ADAM20O43506 726 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 TACR2P21452 398 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 OR3A1P47881 315 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 JAK3P52333 1124 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 TMEM240Q5SV17 173 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 SERPINA9Q86WD7 417 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 OR56B1Q8NGI3 324 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 OR4K15Q8NH41 348 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 RHOXF1Q8NHV9 184 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 FAM174AQ8TBP5 190 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 C2CD4CQ8TF44 421 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 SLCO2A1Q92959 643 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 C3orf30Q96M34 536 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 SLC38A2Q96QD8 506 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 S100A13Q99584 98 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 FAM96AQ9H5X1 160 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 CSNK1G1Q9HCP0 422 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 POLE4Q9NR33 117 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 PXMP2Q9NR77 195 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 CNIH4Q9P003 139 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 CNOT8Q9UFF9 292 aaKnown RBP4.1□□□□□ -1.75
SCN3A-209ENST00000639244 PALD1Q9ULE6 856 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 RHBDD3Q9Y3P4 386 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 RP1P56715 2156 aa4.1□□□□□ -1.75
SCN3A-209ENST00000639244 RNF212BA8MTL3 300 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 SPATA31C2B4DYI2 1134 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 UBDO15205 165 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 APBA3O96018 575 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 MT-CO2P00403 227 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 GOT2P00505 430 aaKnown RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 IFNA5P01569 189 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 NR3C1P04150 777 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 SERPINA2P20848 420 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 NCS1P62166 190 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 SMIM21Q3B7S5 101 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 FAM180AQ6UWF9 173 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 PHF13Q86YI8 300 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 GLB1L2Q8IW92 636 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 LCORLQ8N3X6 602 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 EIF4E3Q8N5X7 224 aaKnown RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 NETO2Q8NC67 525 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 OR10W1Q8NGF6 305 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 ZSCAN18Q8TBC5 510 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 PIGXQ8TBF5 258 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 GPBAR1Q8TDU6 330 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 AURKBQ96GD4 344 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 MYO19Q96H55 970 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 ST6GAL2Q96JF0 529 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 TMEM109Q9BVC6 243 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 ACTRT3Q9BYD9 372 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 SLCO1C1Q9NYB5 712 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 KANSL3Q9P2N6 904 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 TCAF1Q9Y4C2 921 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 ATP7BP35670 1465 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 TRBV2A0A0J9YWF9 115 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 H3BQ06 376 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 CDIPTO14735 213 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 GPR37L1O60883 481 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 ENTPD3O75355 529 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 RAD17O75943 681 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 PDYNP01213 254 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 KDELR1P24390 212 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 HLA-DMAP28067 261 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 TNK2Q07912 1038 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF543Q08ER8 600 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 FABP9Q0Z7S8 132 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 INPP5JQ15735 1006 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF528Q3MIS6 628 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 TBCELQ5QJ74 424 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 PRSS57Q6UWY2 283 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 VN1R5Q7Z5H4 357 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 TSPAN33Q86UF1 283 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 C17orf47Q8NEP4 570 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 OR4F15Q8NGB8 312 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 FBXO17Q96EF6 278 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 CMSS1Q9BQ75 279 aaKnown RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 WRAP53Q9BUR4 548 aaKnown RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 HDHD5Q9BXW7 423 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 PLSCR3Q9NRY6 295 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF230Q9UIE0 474 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 ASB1Q9Y576 335 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 HEMK1Q9Y5R4 338 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 ARHGEF12Q9NZN5 1544 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 GREB1LQ9C091 1923 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 TBC1D3FA6NER0 549 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-209ENST00000639244 KLRC4-KLRK1H3BQV0 150 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 AIPO00170 330 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 LIASO43766 372 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 CNIH1O95406 144 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 GCP02774 474 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 CCNYL3P0C7X3 344 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 PTTG1IPP53801 180 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 SOX8P57073 446 aa4.09□□□□□ -1.75
SCN3A-209ENST00000639244 MEF2AQ02078 507 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms