RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 APMAPQ9HDC9 416 aa14.32□□□□□ -0.12
CLN6-219ENST00000637329 NXT1Q9UKK6 140 aaKnown RBP14.32□□□□□ -0.12
CLN6-219ENST00000637329 PCDHGA8Q9Y5G5 932 aa14.32□□□□□ -0.12
CLN6-219ENST00000637329 DSPPQ9NZW4 1301 aa14.32□□□□□ -0.12
CLN6-219ENST00000637329 FASNP49327 2511 aaKnown RBP14.32□□□□□ -0.12
CLN6-219ENST00000637329 JRKO75564 520 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 SERPINB7O75635 380 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 PRSS23O95084 383 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 FABP3P05413 133 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 GUSBP08236 651 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 ALOX5P09917 674 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 ACP2P11117 423 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 S1PR1P21453 382 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 AGXTP21549 392 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 AQP1P29972 269 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 MAP3K8P41279 467 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 OCA2Q04671 838 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 ZNF155Q12901 538 aaPredicted RBP14.31□□□□□ -0.12
CLN6-219ENST00000637329 EIF3IQ13347 325 aaKnown RBP14.31□□□□□ -0.12
CLN6-219ENST00000637329 ZNHIT3Q15649 155 aaPredicted RBP14.31□□□□□ -0.12
CLN6-219ENST00000637329 NKG7Q16617 165 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 MFSD4BQ5TF39 518 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 HMBOX1Q6NT76 420 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 C16orf62Q7Z3J2 963 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 PIWIL3Q7Z3Z3 882 aaKnown RBP14.31□□□□□ -0.12
CLN6-219ENST00000637329 ARMC8Q8IUR7 673 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 CHDHQ8NE62 594 aaPredicted RBP14.31□□□□□ -0.12
CLN6-219ENST00000637329 PLPP5Q8NEB5 264 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 OR52R1Q8NGF1 315 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 OR14A16Q8NHC5 309 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 GEMIN6Q8WXD5 167 aaKnown RBP14.31□□□□□ -0.12
CLN6-219ENST00000637329 PMM1Q92871 262 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 C16orf58Q96GQ5 468 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 FBXL20Q96IG2 436 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 DEPDC7Q96QD5 511 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 LMF2Q9BU23 707 aaKnown RBP14.31□□□□□ -0.12
CLN6-219ENST00000637329 BDH2Q9BUT1 245 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 KLHL4Q9C0H6 718 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 VN1R1Q9GZP7 353 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 WDR54Q9H977 334 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 IL1RAPQ9NPH3 570 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 POLE3Q9NRF9 147 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 SLC22A11Q9NSA0 550 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 DNAJB9Q9UBS3 223 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 CTSFQ9UBX1 484 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 CNOT11Q9UKZ1 510 aaKnown RBP14.31□□□□□ -0.12
CLN6-219ENST00000637329 BAG5Q9UL15 447 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 ZMIZ1Q9ULJ6 1067 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 PADI2Q9Y2J8 665 aa14.31□□□□□ -0.12
CLN6-219ENST00000637329 GPC6Q9Y625 555 aaPredicted RBP14.31□□□□□ -0.12
CLN6-219ENST00000637329 PRAMEF27A3QJZ7 478 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 VSTM2BA6NLU5 285 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 CLOCKO15516 846 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 TPST1O60507 370 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 DPM1O60762 260 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 IFNA16P05015 189 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 ZGLP1P0C6A0 271 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 LIMK1P53667 647 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 SYPL1Q16563 259 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 ISXQ2M1V0 245 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 ARHGAP11BQ3KRB8 267 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 IFI44LQ53G44 452 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 STPG1Q5TH74 334 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 DGAT2L6Q6ZPD8 337 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 OVCH1Q7RTY7 1134 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 GALNT10Q86SR1 603 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 ZDHHC21Q8IVQ6 265 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 PACRGLQ8N7B6 248 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 SLC38A9Q8NBW4 561 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 SLC16A11Q8NCK7 471 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 FAM110BQ8TC76 370 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 STT3BQ8TCJ2 826 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 SLC9A6Q92581 669 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 DAZLQ92904 295 aaKnown RBP14.3□□□□□ -0.12
CLN6-219ENST00000637329 YIPF4Q9BSR8 244 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 DDA1Q9BW61 102 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 TRIM45Q9H8W5 580 aaPredicted RBP14.3□□□□□ -0.12
CLN6-219ENST00000637329 ANKRA2Q9H9E1 313 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 THSD1Q9NS62 852 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 PRODH2Q9UF12 536 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 CFL2Q9Y281 166 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 DTNAQ9Y4J8 743 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 LOXL2Q9Y4K0 774 aa14.3□□□□□ -0.12
CLN6-219ENST00000637329 HEMK1Q9Y5R4 338 aaPredicted RBP14.3□□□□□ -0.12
CLN6-219ENST00000637329 ASPMQ8IZT6 3477 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 MYOCOSA0A1B0GUC4 107 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 C17orf105B2RV13 164 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 H0YJX3 145 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 M0QX08 132 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 MEN1O00255 615 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 NKX2-2O95096 273 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 MFN2O95140 757 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 H6PDO95479 791 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 RECKO95980 971 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 CHRM4P08173 479 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 KCNJ10P78508 379 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 DUSP8Q13202 625 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 EXOSC7Q15024 291 aaKnown RBP14.29□□□□□ -0.12
CLN6-219ENST00000637329 DUSP5Q16690 384 aa14.29□□□□□ -0.12
CLN6-219ENST00000637329 GRAMD1BQ3KR37 738 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms