RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 NIPSNAP1Q9BPW8 284 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 WRAP53Q9BUR4 548 aaKnown RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 RSPO3Q9BXY4 272 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 HDHD2Q9H0R4 259 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 CHST8Q9H2A9 424 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 TPK1Q9H3S4 243 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 DPEP2Q9H4A9 486 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 SERHL2Q9H4I8 314 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 RNF121Q9H920 327 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ENAMQ9NRM1 1142 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 C1GALT1Q9NS00 363 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ACSS1Q9NUB1 689 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ERVK13-1Q9NX77 482 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 MRPL39Q9NYK5 338 aaKnown RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 FTSJ1Q9UET6 329 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ICKQ9UPZ9 632 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 MEIOCA2RUB1 952 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 RFXAPO00287 272 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 AP3D1O14617 1153 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 PCDH17O14917 1159 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 DSCR3O14972 297 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 FLRT2O43155 660 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 PRODHO43272 600 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 TLX2O43763 284 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 CYP7B1O75881 506 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 FGF18O76093 207 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 KCNK2O95069 426 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 C1orf105O95561 183 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 DHFRP00374 187 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 C1QCP02747 245 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 CCNYL3P0C7X3 344 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 PEPDP12955 493 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF8P17098 575 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 LHCGRP22888 699 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 NUDT1P36639 197 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 NR4A2P43354 598 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 HTR3AP46098 478 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 CRYBA2P53672 197 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 PRR5P85299 388 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ZXDBP98169 803 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 MAB21L1Q13394 359 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 GINS1Q14691 196 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 TRAM2Q15035 370 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 CDK10Q15131 360 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 SLC5A12Q1EHB4 618 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF311Q5JNZ3 666 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 PRSS36Q5K4E3 855 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 TIGD3Q6B0B8 471 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 SLC27A4Q6P1M0 643 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 SERPINA13PQ6UXR4 307 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 Q6ZPB1 254 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF767PQ75MW2 155 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ADCK2Q7Z695 626 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 CCDC71Q8IV32 467 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 VRK3Q8IV63 474 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 FAM26EQ8N5C1 309 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 LRRC17Q8N6Y2 441 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 NANOGP1Q8N7R0 232 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 PSD4Q8NDX1 1056 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 TOR1AIP2Q8NFQ8 470 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 OR52L1Q8NGH7 329 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 WFDC5Q8TCV5 224 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 SFXN5Q8TD22 340 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 SCAMP4Q969E2 229 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 UBE2FQ969M7 185 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 NUS1Q96E22 293 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF764Q96H86 408 aaPredicted RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 TMEM19Q96HH6 336 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 OPALINQ96PE5 141 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 TMEM246Q9BRR3 403 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 RHNO1Q9BSD3 238 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ALOXE3Q9BYJ1 711 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 NIPAL2Q9H841 368 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 TOR4AQ9NXH8 423 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 PFDN2Q9UHV9 154 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 KLHL21Q9UJP4 597 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 EML5Q05BV3 1969 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 C17orf113A0A1B0GUU1 675 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 A0A1W2PQ09 198 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 TMEM129A0AVI4 362 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 TSPAN11A1L157 253 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 SLC35F4A4IF30 521 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 A6NCN8 305 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 C1QTNF3-AMACRE9PGA6 284 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 CTDSP2O14595 271 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 RECKO95980 971 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 SERPIND1P05546 499 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 CKMT1AP12532 417 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 TNFRSF1BP20333 461 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 TCEA1P23193 301 aaKnown RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 HLA-DMAP28067 261 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 CTHP32929 405 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ETV3P41162 512 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 SSR2P43308 183 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 CCT3P49368 545 aaKnown RBP3.76□□□□□ -1.81
SCN1A-214ENST00000637038 SEMG2Q02383 582 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 ST3GAL3Q11203 375 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 IL18Q14116 193 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 GPNMBQ14956 572 aa3.76□□□□□ -1.81
SCN1A-214ENST00000637038 PLK5Q496M5 336 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms