RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 HPDLQ96IR7 371 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 PIWIL1Q96J94 861 aaKnown RBP2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 ADGRG7Q96K78 797 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 NODALQ96S42 347 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 PLIN2Q99541 437 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 MRPL45Q9BRJ2 306 aaKnown RBP2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 LRRC1Q9BTT6 524 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 PANK2Q9BZ23 570 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 OSBPL8Q9BZF1 889 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 ELOVL4Q9GZR5 314 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 TNMDQ9H2S6 317 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 TMEM245Q9H330 911 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 ACTL8Q9H568 366 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 SMYD3Q9H7B4 428 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 AKIRIN1Q9H9L7 192 aaPredicted RBP2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 RNPEPL1Q9HAU8 725 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 ZDHHC4Q9NPG8 344 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 SPHK2Q9NRA0 654 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 AGPAT3Q9NRZ7 376 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 PNPLA3Q9NST1 481 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 PKD2L2Q9NZM6 624 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 AKAP7Q9P0M2 348 aaPredicted RBP2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 THAP10Q9P2Z0 257 aaPredicted RBP2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 IL19Q9UHD0 177 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 ZDHHC2Q9UIJ5 367 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 DAPK2Q9UIK4 370 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 STOML2Q9UJZ1 356 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 FBXW2Q9UKT8 454 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 TMED3Q9Y3Q3 217 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 KNTC1P50748 2209 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 TEP1Q99973 2627 aaKnown RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 DOCK4Q8N1I0 1966 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 DOPEY1Q5JWR5 2465 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 AHCTF1Q8WYP5 2266 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 DOCK9Q9BZ29 2069 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 IGHV4OR15-8A0A075B7B6 117 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 A0A0B4J203 849 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 A0A1W2PN81 502 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 A0A1W2PS18 150 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 FAM149AA5PLN7 773 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 GOLGA8IPA6NC78 632 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 GOLGA8JA6NMD2 632 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 LRRIQ3A6PVS8 624 aaPredicted RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 TMEM150CB9EJG8 249 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 E9PAM4 449 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 F8VVB4 439 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 F8VWA3 439 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 O00370 1275 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 RTCAO00442 366 aaKnown RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 SLC9A3R1O14745 358 aaPredicted RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 KLRC4O43908 158 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 VEGFDO43915 354 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 CTSVO60911 334 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 SEC22BO75396 215 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 CRCPO75575 148 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 GLCEO94923 617 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 PIGNO95427 931 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 ZBTB11O95625 1053 aaPredicted RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 TBX6O95947 436 aaPredicted RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 MOCS2O96007 188 aaPredicted RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 ASS1P00966 412 aaKnown RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 IGLV2-11P01706 119 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 IGLV3-27P01718 113 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 IGHV4-39P01824 125 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 APODP05090 189 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 IGHV4-34P06331 123 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 GP1BBP13224 206 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 CYP2A7P20853 494 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 PIK3R1P27986 724 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 SERPINB6P35237 376 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 CHRNA7P36544 502 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 DHPSP49366 369 aaPredicted RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 HOXA1P49639 335 aaPredicted RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 ACADVLP49748 655 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 SERPINH1P50454 418 aaKnown RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 TPMTP51580 245 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 FUT6P51993 359 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 MYL6P60660 151 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 SNRPFP62306 86 aaKnown RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 PITX1P78337 314 aaPredicted RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 ENPEPQ07075 957 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 DMPKQ09013 629 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 RASGEF1BQ0VAM2 473 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 SNRNP35Q16560 246 aaKnown RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 RBBP7Q16576 425 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 PHKG1Q16816 387 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 KIF19Q2TAC6 998 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 TTC31Q49AM3 519 aaPredicted RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 PHLDA2Q53GA4 152 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 LRRC38Q5VT99 294 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 OR4A47Q6IF82 309 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 FAM166AQ6J272 317 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 SPSB3Q6PJ21 355 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 CORO6Q6QEF8 472 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 UNQ6126/PRO20091Q6UXV3 157 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 TUBA1AQ71U36 451 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 TRMT11Q7Z4G4 463 aaKnown RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 GPR141Q7Z602 305 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 SCD5Q86SK9 330 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 ANKRD46Q86W74 232 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms