RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 CPMP14384 443 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 PORP16435 677 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 MAGEA2P43356 314 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 MAGEA8P43361 318 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 MAN2A2P49641 1150 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 AQP4P55087 323 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 ITGA1P56199 1179 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 MRPS35P82673 323 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 LSM11P83369 360 aaKnown RBP eCLIP8.87□□□□□ -0.991e-7■■■■■ 32.8
PDLIM5-223ENST00000627587 MGAT2Q10469 447 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 TRA2AQ13595 282 aaKnown RBP eCLIP8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 TBR1Q16650 682 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 FHL5Q5TD97 284 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 TLDC1Q6P9B6 456 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 DGAT2L6Q6ZPD8 337 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 CBLL1Q75N03 491 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 CCDC80Q76M96 950 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 ARHGAP22Q7Z5H3 698 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 TSEN54Q7Z6J9 526 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 VTCN1Q7Z7D3 282 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 DTX1Q86Y01 620 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 ZC3H7AQ8IWR0 971 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 METTL27Q8N6F8 245 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 ANKFN1Q8N957 763 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 OR4D9Q8NGE8 314 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 OR5D16Q8NGK9 328 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 SLC38A5Q8WUX1 472 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 DNAJC9Q8WXX5 260 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 KAT2AQ92830 837 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 EME1Q96AY2 570 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 TAMM41Q96BW9 452 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 ZNF501Q96CX3 271 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 OTUB1Q96FW1 271 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 C16orf58Q96GQ5 468 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 PYURFQ96I23 114 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 ZNF570Q96NI8 536 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 TAAR9Q96RI9 348 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 SLC29A1Q99808 456 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 RBCK1Q9BYM8 510 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 VCXQ9H320 206 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 CUTCQ9NTM9 273 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 SERTAD3Q9UJW9 196 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 ANGPT4Q9Y264 503 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 IGHV5-10-1A0A0J9YXX1 117 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 OR2W5A6NFC9 320 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 PRAMEF25A6NGN4 478 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 C5orf58C9J3I9 102 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 BMP10O95393 424 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 LDLRP01130 860 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 ATP1B1P05026 303 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 CT62P0C5K7 136 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 ANKRD34CP0C6C1 535 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 MATN1P21941 496 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 KHKP50053 298 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 EFNA3P52797 238 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 MAPK10P53779 464 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 TGIF1Q15583 401 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 ATP6AP1Q15904 470 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 ZNF628Q5EBL2 1059 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 EXOSC6Q5RKV6 272 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 TTLL10Q6ZVT0 673 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 EIF3MQ7L2H7 374 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 ICA1LQ8NDH6 482 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 NUP43Q8NFH3 380 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 MIPOL1Q8TD10 442 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 DOK4Q8TEW6 326 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 EXTL1Q92935 676 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 MVB12AQ96EY5 273 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 CENPNQ96H22 339 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 PEX11GQ96HA9 241 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 CIB1Q99828 191 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 NDC1Q9BTX1 674 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 BDH2Q9BUT1 245 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 SLC25A18Q9H1K4 315 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 OR51I1Q9H343 314 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 RUBCNLQ9H714 662 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 A4GALTQ9NPC4 353 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 FGF21Q9NSA1 209 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 DDX18Q9NVP1 670 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 ADPRHL2Q9NX46 363 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 TRPC4Q9UBN4 977 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 DTNAQ9Y4J8 743 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 PCDHGA3Q9Y5H0 932 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 KCNE3Q9Y6H6 103 aa8.87□□□□□ -0.99
PDLIM5-223ENST00000627587 PIEZO2Q9H5I5 2752 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 STMND1H3BQB6 276 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 PLOD2O00469 737 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 DLGAP1O14490 977 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 CLDN4O14493 209 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 SOCS2O14508 198 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 ZNF749O43361 778 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 DEAF1O75398 565 aaPredicted RBP8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 SLITRK5O94991 958 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 IFNA14P01570 189 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 OPN1SWP03999 348 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 BCHEP06276 602 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 OR12D1P0DN82 309 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 ARSFP54793 590 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 KCNJ10P78508 379 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms