RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 ZNF658Q5TYW1 1059 aaPredicted RBP2.32□□□□□ -2.04
VBP1-204ENST00000625964 SLC22A10Q63ZE4 541 aa2.32□□□□□ -2.04
VBP1-204ENST00000625964 ZNF544Q6NX49 715 aa2.32□□□□□ -2.04
VBP1-204ENST00000625964 Q6ZVH6 145 aa2.32□□□□□ -2.04
VBP1-204ENST00000625964 TOM1L2Q6ZVM7 507 aa2.32□□□□□ -2.04
VBP1-204ENST00000625964 TSEN54Q7Z6J9 526 aaKnown RBP2.32□□□□□ -2.04
VBP1-204ENST00000625964 ANKRD23Q86SG2 305 aa2.32□□□□□ -2.04
VBP1-204ENST00000625964 IQCA1Q86XH1 822 aa2.32□□□□□ -2.04
VBP1-204ENST00000625964 GPR137CQ8N3F9 429 aa2.32□□□□□ -2.04
VBP1-204ENST00000625964 LINC01006Q8NI28 216 aa2.32□□□□□ -2.04
VBP1-204ENST00000625964 CCDC26Q8TAB7 109 aa2.32□□□□□ -2.04
VBP1-204ENST00000625964 ZNF564Q8TBZ8 553 aaPredicted RBP2.32□□□□□ -2.04
VBP1-204ENST00000625964 APOOQ9BUR5 198 aa2.32□□□□□ -2.04
VBP1-204ENST00000625964 NLNQ9BYT8 704 aa2.32□□□□□ -2.04
VBP1-204ENST00000625964 PLSCR3Q9NRY6 295 aa2.32□□□□□ -2.04
VBP1-204ENST00000625964 PIGVQ9NUD9 493 aa2.32□□□□□ -2.04
VBP1-204ENST00000625964 CWC25Q9NXE8 425 aaPredicted RBP2.32□□□□□ -2.04
VBP1-204ENST00000625964 COPS7AQ9UBW8 275 aa2.32□□□□□ -2.04
VBP1-204ENST00000625964 SLC2A6Q9UGQ3 507 aa2.32□□□□□ -2.04
VBP1-204ENST00000625964 ERCC6L2Q5T890 1561 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 ATRXP46100 2492 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 ZFP92A6NM28 416 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 APBB3O95704 486 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 GSTA1P08263 222 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 CD1EP15812 388 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 MGMTP16455 207 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 ZNF18P17022 549 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 NPY2RP49146 381 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 P2RY4P51582 365 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 NLRP11P59045 1033 aaKnown RBP2.31□□□□□ -2.04
VBP1-204ENST00000625964 CCZ1BP86790 482 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 CCZ1P86791 482 aaPredicted RBP2.31□□□□□ -2.04
VBP1-204ENST00000625964 SMC1AQ14683 1233 aaKnown RBP2.31□□□□□ -2.04
VBP1-204ENST00000625964 PRAMEF7Q5VXH5 474 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 ATRAIDQ6UW56 229 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 BNIPLQ7Z465 357 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 ZNF677Q86XU0 584 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 SFRP1Q8N474 314 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 MLKLQ8NB16 471 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 OR2L5Q8NG80 312 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 OR4F17Q8NGA8 305 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 OR13F1Q8NGS4 319 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 U2AF1L4Q8WU68 220 aaKnown RBP2.31□□□□□ -2.04
VBP1-204ENST00000625964 OR4F4Q96R69 305 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 KIR2DL4Q99706 377 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 ELOVL4Q9GZR5 314 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 TRPV6Q9H1D0 765 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 TMEM245Q9H330 911 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 NDUFA13Q9P0J0 144 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 DPM3Q9P2X0 92 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 CCPG1Q9ULG6 757 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 ZNF175Q9Y473 711 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 ZNF608Q9ULD9 1512 aaPredicted RBP2.31□□□□□ -2.04
VBP1-204ENST00000625964 SYNJ2O15056 1496 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 FANCD2Q9BXW9 1451 aa2.31□□□□□ -2.04
VBP1-204ENST00000625964 COL16A1Q07092 1604 aaPredicted RBP2.3□□□□□ -2.04
VBP1-204ENST00000625964 CCDC69A6NI79 296 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 RTN2O75298 545 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 SYNGR4O95473 234 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 ECDO95905 644 aaPredicted RBP2.3□□□□□ -2.04
VBP1-204ENST00000625964 APRTP07741 180 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 ELK1P19419 428 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 IGFBP5P24593 272 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 MARCKSP29966 332 aaPredicted RBP2.3□□□□□ -2.04
VBP1-204ENST00000625964 OR1D4P47884 311 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 ALDH3B2P48448 385 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 TRPC1P48995 793 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 CAPRIN1Q14444 709 aaKnown RBP2.3□□□□□ -2.04
VBP1-204ENST00000625964 CMPK2Q5EBM0 449 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 PAGE2BQ5JRK9 111 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 ZNF410Q86VK4 478 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 GPR65Q8IYL9 337 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 MCOLN2Q8IZK6 566 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 TMEM37Q8WXS4 190 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 P3H4Q92791 437 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 VMP1Q96GC9 406 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 DEFB118Q96PH6 123 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 HCAR1Q9BXC0 346 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 ARGLU1Q9NWB6 273 aaPredicted RBP2.3□□□□□ -2.04
VBP1-204ENST00000625964 KLHDC2Q9Y2U9 406 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 IFT140Q96RY7 1462 aa2.3□□□□□ -2.04
VBP1-204ENST00000625964 URB2Q14146 1524 aaKnown RBP2.29□□□□□ -2.04
VBP1-204ENST00000625964 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.29□□□□□ -2.04
VBP1-204ENST00000625964 TLR4O00206 839 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 SLC17A2O00624 439 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 ARPC1BO15143 372 aaKnown RBP2.29□□□□□ -2.04
VBP1-204ENST00000625964 NUDT21O43809 227 aaKnown RBP2.29□□□□□ -2.04
VBP1-204ENST00000625964 KRT6AP02538 564 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 KRT6BP04259 564 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 HMOX1P09601 288 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 ACVR1BP36896 505 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 CASP3P42574 277 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 KRT6CP48668 564 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 HLCSP50747 726 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 CNN1P51911 297 aaKnown RBP2.29□□□□□ -2.04
VBP1-204ENST00000625964 METAP1P53582 386 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 NOP14P78316 857 aaKnown RBP2.29□□□□□ -2.04
VBP1-204ENST00000625964 KRT83P78385 493 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 C17orf67Q0P5P2 114 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 PPP1R8Q12972 351 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms