RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 CDRT4Q8N9R6 151 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 OR4D9Q8NGE8 314 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.04■□□□□ 0.8
SPAST-204ENST00000621856 RIT1Q92963 219 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 CTHRC1Q96CG8 243 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 ZNF501Q96CX3 271 aaPredicted RBP20.04■□□□□ 0.8
SPAST-204ENST00000621856 SLC38A1Q9H2H9 487 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 SMOC1Q9H4F8 434 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 CXorf21Q9HAI6 301 aa20.04■□□□□ 0.8
SPAST-204ENST00000621856 NCOR1O75376 2440 aa20.03■□□□□ 0.8
SPAST-204ENST00000621856 A8MVJ9 347 aa20.03■□□□□ 0.8
SPAST-204ENST00000621856 COQ9O75208 318 aa20.03■□□□□ 0.8
SPAST-204ENST00000621856 RHCEP18577 417 aa20.03■□□□□ 0.8
SPAST-204ENST00000621856 IGFBP5P24593 272 aa20.03■□□□□ 0.8
SPAST-204ENST00000621856 GTF2A1P52655 376 aaPredicted RBP20.03■□□□□ 0.8
SPAST-204ENST00000621856 ADARB1P78563 741 aaKnown RBP20.03■□□□□ 0.8
SPAST-204ENST00000621856 MYBPC1Q00872 1141 aa20.03■□□□□ 0.8
SPAST-204ENST00000621856 ZNF155Q12901 538 aaPredicted RBP20.03■□□□□ 0.8
SPAST-204ENST00000621856 MLIPQ5VWP3 458 aa20.03■□□□□ 0.8
SPAST-204ENST00000621856 ZCCHC12Q6PEW1 402 aa20.03■□□□□ 0.8
SPAST-204ENST00000621856 ZNF555Q8NEP9 628 aa20.03■□□□□ 0.8
SPAST-204ENST00000621856 OR52R1Q8NGF1 315 aa20.03■□□□□ 0.8
SPAST-204ENST00000621856 APOBEC4Q8WW27 367 aaKnown RBP20.03■□□□□ 0.8
SPAST-204ENST00000621856 DPYSL5Q9BPU6 564 aa20.03■□□□□ 0.8
SPAST-204ENST00000621856 PIGUQ9H490 435 aa20.03■□□□□ 0.8
SPAST-204ENST00000621856 TRIM45Q9H8W5 580 aaPredicted RBP20.03■□□□□ 0.8
SPAST-204ENST00000621856 C3orf18Q9UK00 162 aa20.03■□□□□ 0.8
SPAST-204ENST00000621856 LYVE1Q9Y5Y7 322 aa20.03■□□□□ 0.8
SPAST-204ENST00000621856 NINQ8N4C6 2090 aa20.02■□□□□ 0.8
SPAST-204ENST00000621856 OR2W5A6NFC9 320 aa20.02■□□□□ 0.8
SPAST-204ENST00000621856 DSCR3O14972 297 aa20.02■□□□□ 0.8
SPAST-204ENST00000621856 JRKO75564 520 aa20.02■□□□□ 0.8
SPAST-204ENST00000621856 CLIC3O95833 236 aa20.02■□□□□ 0.8
SPAST-204ENST00000621856 ANKRD34CP0C6C1 535 aa20.02■□□□□ 0.8
SPAST-204ENST00000621856 FBLP22087 321 aaKnown RBP20.02■□□□□ 0.8
SPAST-204ENST00000621856 MPLP40238 635 aa20.02■□□□□ 0.8
SPAST-204ENST00000621856 DUSP3P51452 185 aaPredicted RBP20.02■□□□□ 0.8
SPAST-204ENST00000621856 PDX1P52945 283 aa20.02■□□□□ 0.8
SPAST-204ENST00000621856 IL1RL1Q01638 556 aa20.02■□□□□ 0.8
SPAST-204ENST00000621856 RFX4Q33E94 735 aa20.02■□□□□ 0.8
SPAST-204ENST00000621856 ARHGAP11BQ3KRB8 267 aa20.02■□□□□ 0.8
SPAST-204ENST00000621856 YOD1Q5VVQ6 348 aaPredicted RBP20.02■□□□□ 0.8
SPAST-204ENST00000621856 CYP4Z1Q86W10 505 aa20.02■□□□□ 0.8
SPAST-204ENST00000621856 ATG16L2Q8NAA4 619 aa20.02■□□□□ 0.8
SPAST-204ENST00000621856 MBOAT4Q96T53 435 aa20.02■□□□□ 0.8
SPAST-204ENST00000621856 PINK1Q9BXM7 581 aa20.02■□□□□ 0.8
SPAST-204ENST00000621856 RSPO3Q9BXY4 272 aaPredicted RBP20.02■□□□□ 0.8
SPAST-204ENST00000621856 CACYBPQ9HB71 228 aaKnown RBP20.02■□□□□ 0.8
SPAST-204ENST00000621856 PNPLA3Q9NST1 481 aa20.02■□□□□ 0.8
SPAST-204ENST00000621856 TMEFF2Q9UIK5 374 aaPredicted RBP20.02■□□□□ 0.8
SPAST-204ENST00000621856 TNFAIP8O95379 198 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 CBX7O95931 251 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 IFNA16P05015 189 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 CKMT1AP12532 417 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 STT3AP46977 705 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 GCGRP47871 477 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 DAPP51397 102 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 ACY1Q03154 408 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 GANABQ14697 944 aaKnown RBP20.02■□□□□ 0.79
SPAST-204ENST00000621856 PROX2Q3B8N5 592 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 MFSD4BQ5TF39 518 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 DEF8Q6ZN54 512 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 GALNT5Q7Z7M9 940 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 OFCC1Q8IZS5 231 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 COX18Q8N8Q8 333 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 OR52J3Q8NH60 311 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 GIPC3Q8TF64 312 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 QRSL1Q9H0R6 528 aaKnown RBP20.02■□□□□ 0.79
SPAST-204ENST00000621856 ARRDC1-AS1Q9H2J1 176 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 ZNF304Q9HCX3 659 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 SLC9A8Q9Y2E8 581 aa20.02■□□□□ 0.79
SPAST-204ENST00000621856 IGHV5-10-1A0A0J9YXX1 117 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 AGRPO00253 132 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 GADD45GO95257 159 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 DSG2Q14126 1118 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 SERTAD2Q14140 314 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 EXOC3L2Q2M3D2 409 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 ZNF311Q5JNZ3 666 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 C1orf189Q5VU69 101 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 TTC23Q5W5X9 447 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 ARHGAP22Q7Z5H3 698 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 RCBTB1Q8NDN9 531 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 GPR151Q8TDV0 419 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 CCDC74BQ96LY2 380 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 STACQ99469 402 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 PELOQ9BRX2 385 aaKnown RBP20.01■□□□□ 0.79
SPAST-204ENST00000621856 SLC7A5P2Q9GIP4 190 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 NECTIN3Q9NQS3 549 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 DUSP22Q9NRW4 184 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 SLC13A4Q9UKG4 626 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 WDR45Q9Y484 360 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 DSPPQ9NZW4 1301 aa20.01■□□□□ 0.79
SPAST-204ENST00000621856 A0A1B0GX78 115 aa20■□□□□ 0.79
SPAST-204ENST00000621856 M0R3H8 397 aa20■□□□□ 0.79
SPAST-204ENST00000621856 PABPC4LP0CB38 370 aaKnown RBP20■□□□□ 0.79
SPAST-204ENST00000621856 KCNAB2Q13303 367 aa20■□□□□ 0.79
SPAST-204ENST00000621856 ZNF267Q14586 743 aaPredicted RBP20■□□□□ 0.79
SPAST-204ENST00000621856 EXOSC6Q5RKV6 272 aaKnown RBP20■□□□□ 0.79
SPAST-204ENST00000621856 ARHGAP40Q5TG30 622 aa20■□□□□ 0.79
SPAST-204ENST00000621856 BMP8AQ7Z5Y6 402 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms