RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 CNIH4Q9P003 139 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 LRCH1Q9Y2L9 728 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 OARD1Q9Y530 152 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 HIVEP2P31629 2446 aa7.18□□□□□ -1.26
CLK1-215ENST00000621181 LRRC3CA6NJW4 275 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 G3V2L1 256 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 TRAPPC6AO75865 159 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 KITP10721 976 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 ANPEPP15144 967 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 CEACAM8P31997 349 aaPredicted RBP7.17□□□□□ -1.26
CLK1-215ENST00000621181 GMPRP36959 345 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 AGFG1P52594 562 aaKnown RBP7.17□□□□□ -1.26
CLK1-215ENST00000621181 ZNF136P52737 540 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 MRPS35P82673 323 aaKnown RBP7.17□□□□□ -1.26
CLK1-215ENST00000621181 SORDQ00796 357 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 PLIN5Q00G26 463 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 ZNF460Q14592 562 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 POU4F3Q15319 338 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 SF3B4Q15427 424 aaKnown RBP eCLIP7.17□□□□□ -1.268e-9■■■■■ 52
CLK1-215ENST00000621181 TSNQ15631 228 aaKnown RBP7.17□□□□□ -1.26
CLK1-215ENST00000621181 TSNAXIP1Q2TAA8 658 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 C18orf21Q32NC0 220 aaPredicted RBP7.17□□□□□ -1.26
CLK1-215ENST00000621181 GRTP1Q5TC63 336 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 SHEQ5VZ18 495 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 ADNP2Q6IQ32 1131 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 RNF111Q6ZNA4 994 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 VN1R5Q7Z5H4 357 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 ADAMTSL2Q86TH1 951 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 DND1Q8IYX4 353 aaKnown RBP7.17□□□□□ -1.26
CLK1-215ENST00000621181 ARHGAP24Q8N264 748 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 PLD6Q8N2A8 252 aaKnown RBP7.17□□□□□ -1.26
CLK1-215ENST00000621181 SLC15A4Q8N697 577 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 SRFBP1Q8NEF9 429 aaKnown RBP7.17□□□□□ -1.26
CLK1-215ENST00000621181 C7orf57Q8NEG2 295 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 STON2Q8WXE9 905 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 RHBDF1Q96CC6 855 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 ARSGQ96EG1 525 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 ART5Q96L15 291 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 ZNF597Q96LX8 424 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 F2RL3Q96RI0 385 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 RBBP8Q99708 897 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 MAPKAP1Q9BPZ7 522 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 USB1Q9BQ65 265 aaKnown RBP7.17□□□□□ -1.26
CLK1-215ENST00000621181 ROGDIQ9GZN7 287 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 PRDM7Q9NQW5 492 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 BEX4Q9NWD9 120 aaPredicted RBP7.17□□□□□ -1.26
CLK1-215ENST00000621181 WWOXQ9NZC7 414 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 CHCHD2Q9Y6H1 151 aaPredicted RBP7.17□□□□□ -1.26
CLK1-215ENST00000621181 CCDC189A1A4V9 331 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 KDM4EB2RXH2 506 aaPredicted RBP7.17□□□□□ -1.26
CLK1-215ENST00000621181 ARHGEF9O43307 516 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 FGF17O60258 216 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 KLHL2O95198 593 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 LRATO95237 230 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 GOSR1O95249 250 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 TBX6O95947 436 aaPredicted RBP7.17□□□□□ -1.26
CLK1-215ENST00000621181 FBXO45P0C2W1 286 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 CD53P19397 219 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 CPN2P22792 545 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 OPRM1P35372 400 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 SSR2P43308 183 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 SLC6A12P48065 614 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 ALDH18A1P54886 795 aaKnown RBP7.17□□□□□ -1.26
CLK1-215ENST00000621181 ABCE1P61221 599 aaKnown RBP7.17□□□□□ -1.26
CLK1-215ENST00000621181 CRYZQ08257 329 aaKnown RBP7.17□□□□□ -1.26
CLK1-215ENST00000621181 TOMM20Q15388 145 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 TGFBIQ15582 683 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 FBXO48Q5FWF7 155 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 NSUN5P2Q63ZY6 315 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 EPGNQ6UW88 154 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 ZNF793Q6ZN11 406 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 SLC29A4Q7RTT9 530 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 P3H2Q8IVL5 708 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 OR4N5Q8IXE1 308 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 VWA5B2Q8N398 1253 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 ACOT4Q8N9L9 421 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 SNX31Q8N9S9 440 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 CDKL2Q92772 493 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 DIO2Q92813 273 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 ANKRD9Q96BM1 317 aaPredicted RBP7.17□□□□□ -1.26
CLK1-215ENST00000621181 VPS39Q96JC1 886 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 TRIB1Q96RU8 372 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 TIMP4Q99727 224 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 THTPAQ9BU02 230 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 EHD1Q9H4M9 534 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 NT5DC2Q9H857 520 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 SNX15Q9NRS6 342 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 DNAJC11Q9NVH1 559 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 GPRC5BQ9NZH0 403 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 CAMK2AQ9UQM7 478 aa7.17□□□□□ -1.26
CLK1-215ENST00000621181 DOCK7Q96N67 2140 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 MED12Q93074 2177 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 KIAA1549Q9HCM3 1950 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 RTCAO00442 366 aaKnown RBP7.16□□□□□ -1.26
CLK1-215ENST00000621181 SH3BGRLO75368 114 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 SKAP2O75563 359 aaPredicted RBP7.16□□□□□ -1.26
CLK1-215ENST00000621181 IGKV3-11P04433 115 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 SBK3P0C264 359 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 CPA3P15088 417 aa7.16□□□□□ -1.26
CLK1-215ENST00000621181 HIST1H1TP22492 207 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms