RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 COL21A1Q96P44 957 aa19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 TOR3AQ9H497 397 aa19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 SUSD2Q9UGT4 822 aa19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 FITM1A5D6W6 292 aa19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 MITFO75030 526 aaPredicted RBP19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 SEMA7AO75326 666 aa19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 CDC123O75794 336 aaPredicted RBP19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 ZIC2O95409 532 aaPredicted RBP19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 BCL10O95999 233 aa19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 RRM2P31350 389 aa19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 POLR2IP36954 125 aaKnown RBP19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 PIGAP37287 484 aa19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 GABARAPL2P60520 117 aa19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 FAM53BQ14153 422 aa19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 GUSBP11Q6P575 273 aa19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 OR4D11Q8NGI4 311 aa19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 SLC35A4Q96G79 324 aa19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 ZNF300Q96RE9 604 aaPredicted RBP19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 QRSL1Q9H0R6 528 aaKnown RBP19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 THSD1Q9NS62 852 aa19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 BAG5Q9UL15 447 aa19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 TESMINQ9Y4I5 508 aa19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 CLDN16Q9Y5I7 305 aa19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 GPC6Q9Y625 555 aaPredicted RBP19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 MN1Q10571 1320 aaPredicted RBP19.29■□□□□ 0.68
CNTNAP3B-212ENST00000617422 SIGLEC6O43699 453 aa19.28■□□□□ 0.68
CNTNAP3B-212ENST00000617422 IFNA14P01570 189 aa19.28■□□□□ 0.68
CNTNAP3B-212ENST00000617422 CRHBPP24387 322 aa19.28■□□□□ 0.68
CNTNAP3B-212ENST00000617422 DNAJA1P31689 397 aaKnown RBP19.28■□□□□ 0.68
CNTNAP3B-212ENST00000617422 TOP3AQ13472 1001 aaPredicted RBP19.28■□□□□ 0.68
CNTNAP3B-212ENST00000617422 ANKDD1AQ495B1 522 aa19.28■□□□□ 0.68
CNTNAP3B-212ENST00000617422 PERM1Q5SV97 790 aa19.28■□□□□ 0.68
CNTNAP3B-212ENST00000617422 HIPK1Q86Z02 1210 aa19.28■□□□□ 0.68
CNTNAP3B-212ENST00000617422 ZNF555Q8NEP9 628 aa19.28■□□□□ 0.68
CNTNAP3B-212ENST00000617422 TRUB1Q8WWH5 349 aaKnown RBP19.28■□□□□ 0.68
CNTNAP3B-212ENST00000617422 GEMIN6Q8WXD5 167 aaKnown RBP19.28■□□□□ 0.68
CNTNAP3B-212ENST00000617422 ZG16BQ96DA0 208 aa19.28■□□□□ 0.68
CNTNAP3B-212ENST00000617422 ZC3H10Q96K80 434 aaKnown RBP19.28■□□□□ 0.68
CNTNAP3B-212ENST00000617422 RBM4BQ9BQ04 359 aaKnown RBP19.28■□□□□ 0.68
CNTNAP3B-212ENST00000617422 RBM4Q9BWF3 364 aaKnown RBP19.28■□□□□ 0.68
CNTNAP3B-212ENST00000617422 THUMPD1Q9NXG2 353 aaKnown RBP19.28■□□□□ 0.68
CNTNAP3B-212ENST00000617422 HYAL3O43820 417 aaPredicted RBP19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 HS6ST1O60243 411 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 DPM1O60762 260 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 NSA2O95478 260 aaKnown RBP19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 EPPINO95925 133 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 ATXN8OSP0DMR3 200 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 FOLR1P15328 257 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 FPR1P21462 350 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 DAPP51397 102 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 GPLD1P80108 840 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 HSD11B2P80365 405 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 PRICKLE4Q2TBC4 344 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 INAVAQ3KP66 663 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 C16orf87Q6PH81 154 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 C11orf74Q86VG3 221 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 RBM45Q8IUH3 476 aaKnown RBP19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 PLXDC1Q8IUK5 500 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 DTWD2Q8NBA8 298 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 OR4C6Q8NH72 309 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 MS4A4EQ96PG1 132 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 ACTRT3Q9BYD9 372 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 GABARAPL1Q9H0R8 117 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 GAREM1Q9H706 876 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 MAT2BQ9NZL9 334 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 SEMA5BQ9P283 1151 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 LYVE1Q9Y5Y7 322 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 FOXD2O60548 495 aaPredicted RBP19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 DNAJB5O75953 348 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 XCR1P46094 333 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 XAF1Q6GPH4 301 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 LACC1Q8IV20 430 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 MMABQ96EY8 250 aaPredicted RBP19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 ADNPQ9H2P0 1102 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 REEP1Q9H902 201 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 BCL2L10Q9HD36 194 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 PDP1Q9P0J1 537 aaPredicted RBP19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 ATXN7L1Q9ULK2 861 aaPredicted RBP19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 C19orf53Q9UNZ5 99 aaPredicted RBP19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 SEC16AO15027 2179 aa19.27■□□□□ 0.68
CNTNAP3B-212ENST00000617422 TMEM150CB9EJG8 249 aa19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 FFAR1O14842 300 aa19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 PCDHGA12O60330 932 aa19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 JRKO75564 520 aa19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 ZNF182P17025 639 aaPredicted RBP19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 NT5EP21589 574 aa19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 MAGEA8P43361 318 aa19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 KCNJ5P48544 419 aa19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 CD97P48960 835 aa19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 BTG2P78543 158 aa19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 EXOSC7Q15024 291 aaKnown RBP19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 NDUFA9Q16795 377 aa19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 ZNF574Q6ZN55 896 aaPredicted RBP19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 OR1L3Q8NH93 324 aa19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 SLC38A1Q9H2H9 487 aa19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 CAPN10Q9HC96 672 aa19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 FAM118AQ9NWS6 357 aa19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 PTGFRNQ9P2B2 879 aa19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 B3GNT3Q9Y2A9 372 aa19.26■□□□□ 0.67
CNTNAP3B-212ENST00000617422 ZNF451Q9Y4E5 1061 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms