RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 PPP2R2BQ00005 443 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 TNFRSF17Q02223 184 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 DLX2Q07687 328 aaPredicted RBP8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 CPZQ66K79 652 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 FAM180BQ6P0A1 224 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 TMEM184AQ6ZMB5 413 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 OR51A7Q8NH64 312 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 CAPSLQ8WWF8 208 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 GPN2Q9H9Y4 310 aaPredicted RBP8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 TIMMDC1Q9NPL8 285 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 MCUBQ9NWR8 336 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 SLC35A3Q9Y2D2 325 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 GPC6Q9Y625 555 aaPredicted RBP8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 MCM3APO60318 1980 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 CIB4A0PJX0 185 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 H0Y8X5 98 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 PPP6CO00743 305 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 CASC3O15234 703 aaKnown RBP8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 SEC14L5O43304 696 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 TBX1O43435 398 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 EIF1AXP47813 144 aaKnown RBP8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 SLC9A3P48764 834 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 VASPP50552 380 aaPredicted RBP8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 PPP2CBP62714 309 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 PPP2CAP67775 309 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 QPRTQ15274 297 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 PINK1Q9BXM7 581 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 GPR45Q9Y5Y3 372 aa8.92□□□□□ -0.98
CLTCL1-208ENST00000615606 RGPD3A6NKT7 1758 aaPredicted RBP8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 GXYLT2A0PJZ3 443 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 LOC110117498-PIK3R3F6TDL0 507 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 LSM1O15116 133 aaKnown RBP8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 SIGLEC6O43699 453 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 RPP14O95059 124 aaKnown RBP8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 PTNP21246 168 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 EEF1A2Q05639 463 aaKnown RBP8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 COL9A2Q14055 689 aaPredicted RBP8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 CCNIQ14094 377 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 LAPTM4AQ15012 233 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 NDUFA5Q16718 116 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 SLC5A12Q1EHB4 618 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 GTDC1Q4AE62 458 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 KCTD18Q6PI47 426 aaPredicted RBP8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 TECPR1Q7Z6L1 1165 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 DNAJA4Q8WW22 397 aaPredicted RBP8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 SFXN2Q96NB2 322 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 KLHL31Q9H511 634 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 CHMP1AQ9HD42 196 aaPredicted RBP8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 CLEC4AQ9UMR7 237 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 BAIAP2Q9UQB8 552 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 EXOSC1Q9Y3B2 195 aaKnown RBP8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 PLEKHM1Q9Y4G2 1056 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 ENPP4Q9Y6X5 453 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 TRBV11-1A0A0K0K1C0 115 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 METTL12A8MUP2 240 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 ZNF879B4DU55 563 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 ANKRD28O15084 1053 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 ARL6IP5O75915 188 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 AIFM1O95831 613 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 RETP07949 1114 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 PABPC4LP0CB38 370 aaKnown RBP8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 PNMTP11086 282 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 TSFMP43897 325 aaKnown RBP8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 OR1D5P58170 312 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 FOXK1P85037 733 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 FAM189A2Q15884 450 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 PRSS36Q5K4E3 855 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 AGBL4Q5VU57 503 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 GTF2IRD2BQ6EKJ0 949 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 ARHGAP11AQ6P4F7 1023 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 GTF2IRD2Q86UP8 949 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 SATL1Q86VE3 508 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 DIRAS2Q96HU8 199 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 MS4A8Q9BY19 250 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 TMEM138Q9NPI0 162 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 KCMF1Q9P0J7 381 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 KCND3Q9UK17 655 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 WDR90Q96KV7 1748 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 A0A1B0GVI7 797 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 A6NL46 340 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 J3QLW9 94 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 VILLO15195 856 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 HTR1AP08908 422 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 ZNF19P17023 458 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 ITIH1P19827 911 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 GCGRP47871 477 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 NUDT6P53370 316 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 IL18Q14116 193 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 DCST2Q5T1A1 773 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 NKAIN2Q5VXU1 208 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 ARL9Q6T311 187 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 SERPINA11Q86U17 422 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 ALDH16A1Q8IZ83 802 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 MEIOBQ8N635 442 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 BORCS5Q969J3 196 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 ISL2Q96A47 359 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 TMEM80Q96HE8 168 aa8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 ELF4Q99607 663 aaPredicted RBP8.91□□□□□ -0.98
CLTCL1-208ENST00000615606 CLMPQ9H6B4 373 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms