RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 MESP1Q9BRJ9 268 aa3.21□□□□□ -1.89
LIG4-205ENST00000614526 DCUN1D5Q9BTE7 237 aa3.21□□□□□ -1.89
LIG4-205ENST00000614526 SPATA9Q9BWV2 254 aa3.21□□□□□ -1.89
LIG4-205ENST00000614526 GTPBP2Q9BX10 602 aaKnown RBP3.21□□□□□ -1.89
LIG4-205ENST00000614526 ALOXE3Q9BYJ1 711 aa3.21□□□□□ -1.89
LIG4-205ENST00000614526 SLC38A1Q9H2H9 487 aa3.21□□□□□ -1.89
LIG4-205ENST00000614526 FANCEQ9HB96 536 aa3.21□□□□□ -1.89
LIG4-205ENST00000614526 PDE7BQ9NP56 450 aa3.21□□□□□ -1.89
LIG4-205ENST00000614526 A4GALTQ9NPC4 353 aa3.21□□□□□ -1.89
LIG4-205ENST00000614526 C11orf16Q9NQ32 467 aa3.21□□□□□ -1.89
LIG4-205ENST00000614526 SLC13A4Q9UKG4 626 aa3.21□□□□□ -1.89
LIG4-205ENST00000614526 CDC14AQ9UNH5 594 aa3.21□□□□□ -1.89
LIG4-205ENST00000614526 PADI2Q9Y2J8 665 aa3.21□□□□□ -1.89
LIG4-205ENST00000614526 WBP11Q9Y2W2 641 aaKnown RBP3.21□□□□□ -1.89
LIG4-205ENST00000614526 EP300Q09472 2414 aaPredicted RBP3.21□□□□□ -1.89
LIG4-205ENST00000614526 TECTAO75443 2155 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 A0A087WXM4 84 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 A0A1W2PPC1 479 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 H0YAE9 185 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 TOR1BO14657 336 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 VILLO15195 856 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 HYAL3O43820 417 aaPredicted RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 PCDHGA12O60330 932 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 TBX19O60806 448 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 BCAS1O75363 584 aaPredicted RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 OR2B3O76000 313 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 CCNB2O95067 398 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ANGPTL1O95841 491 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ACP2P11117 423 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 PRG2P13727 222 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 FOLR1P15328 257 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 FASLGP48023 281 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 LSM3P62310 102 aaKnown RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 BNC1Q01954 994 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ALDH6A1Q02252 535 aaKnown RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 MAP4K2Q12851 820 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ZNF155Q12901 538 aaPredicted RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 TARDBPQ13148 414 aaKnown RBP eCLIP3.21□□□□□ -1.9
LIG4-205ENST00000614526 CDK5R2Q13319 367 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 APOFQ13790 326 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 MAPK14Q16539 360 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 MICAQ29983 383 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 VWA2Q5GFL6 755 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ZC3H12BQ5HYM0 836 aaKnown RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 LYSMD4Q5XG99 296 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 BHLHB9Q6PI77 547 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 TMEM64Q6YI46 380 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 AHSA2Q719I0 299 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 TMPRSS9Q7Z410 1059 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 P3H2Q8IVL5 708 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 IQCF1Q8N6M8 205 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 OR56A1Q8NGH5 318 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 OR51Q1Q8NH59 317 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 SLC7A13Q8TCU3 470 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ZFPM2Q8WW38 1151 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ANKRD9Q96BM1 317 aaPredicted RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 GIMAP5Q96F15 307 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ZNF354BQ96LW1 612 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 MYCBPQ99417 103 aaPredicted RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 FNDC11Q9BVV2 318 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ACTRT3Q9BYD9 372 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ZNF556Q9HAH1 456 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 PNO1Q9NRX1 252 aaKnown RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 PAK1IP1Q9NWT1 392 aaPredicted RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 SELENONQ9NZV5 590 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ERVK-18Q9QC07 812 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 WARS2Q9UGM6 360 aaKnown RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 GMEB2Q9UKD1 530 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 TMCC3Q9ULS5 477 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 DTX4Q9Y2E6 619 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 WDR45Q9Y484 360 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 KNTC1P50748 2209 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 IGHV1OR21-1A0A087WYE8 117 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 CDC14CA4D256 554 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 SLC1A7O00341 560 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 KPNA4O00629 521 aaPredicted RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 LAMTOR5O43504 91 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 HRO43593 1189 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 UGT2B17O75795 530 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 PDE9AO76083 593 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 HPRP00739 348 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ALPPP05187 535 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 H1F0P07305 194 aaKnown RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 C7P10643 843 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ITGA2P17301 1181 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 RHCEP18577 417 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 GSTM2P28161 218 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 PCSK6P29122 969 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 CSF2RBP32927 897 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 TRHRP34981 398 aaPredicted RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 ARRB1P49407 418 aaPredicted RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 MLLT10P55197 1068 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 TAS2R41P59536 307 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 MVKQ03426 396 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 KCNC4Q03721 635 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 FAM214AQ32MH5 1076 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 CLEC12AQ5QGZ9 265 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 DCST1Q5T197 706 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 FAM69BQ5VUD6 431 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms