RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 ATAD3BQ5T9A4 648 aa16.32■□□□□ 0.2
SREK1-216ENST00000612404 ZNF615Q8N8J6 731 aa16.32■□□□□ 0.2
SREK1-216ENST00000612404 OR7G1Q8NGA0 311 aa16.32■□□□□ 0.2
SREK1-216ENST00000612404 C16orf52Q8NHV5 167 aa16.32■□□□□ 0.2
SREK1-216ENST00000612404 CDS1Q92903 461 aa16.32■□□□□ 0.2
SREK1-216ENST00000612404 TMEM19Q96HH6 336 aa16.32■□□□□ 0.2
SREK1-216ENST00000612404 GORASP2Q9H8Y8 452 aa16.32■□□□□ 0.2
SREK1-216ENST00000612404 FOLH1BQ9HBA9 442 aa16.32■□□□□ 0.2
SREK1-216ENST00000612404 COPS7AQ9UBW8 275 aa16.32■□□□□ 0.2
SREK1-216ENST00000612404 ANGPT4Q9Y264 503 aa16.32■□□□□ 0.2
SREK1-216ENST00000612404 RAD1O60671 282 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 SLC37A1P57057 533 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 EEF1A2Q05639 463 aaKnown RBP16.31■□□□□ 0.2
SREK1-216ENST00000612404 ZNHIT3Q15649 155 aaPredicted RBP16.31■□□□□ 0.2
SREK1-216ENST00000612404 REEP3Q6NUK4 255 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 ZCCHC12Q6PEW1 402 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 TMEM205Q6UW68 189 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 RNF111Q6ZNA4 994 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 C16orf62Q7Z3J2 963 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 GPR151Q8TDV0 419 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 ZNF721Q8TF20 911 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 EXD2Q9NVH0 621 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 FARSAQ9Y285 508 aaKnown RBP16.31■□□□□ 0.2
SREK1-216ENST00000612404 DTX4Q9Y2E6 619 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 V9GYQ6 96 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 SEC24DO94855 1032 aaPredicted RBP16.31■□□□□ 0.2
SREK1-216ENST00000612404 AGR2O95994 175 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 CLPSP04118 112 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 RAB40ALP0C0E4 278 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 GPAT3Q53EU6 434 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 RPS26P11Q5JNZ5 115 aaPredicted RBP16.31■□□□□ 0.2
SREK1-216ENST00000612404 INTS11Q5TA45 600 aaKnown RBP16.31■□□□□ 0.2
SREK1-216ENST00000612404 PAPD4Q6PIY7 484 aaKnown RBP16.31■□□□□ 0.2
SREK1-216ENST00000612404 COX18Q8N8Q8 333 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 MORN4Q8NDC4 146 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 PYDC1Q8WXC3 89 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 LPAR4Q99677 370 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 PRODH2Q9UF12 536 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 TCFL5Q9UL49 500 aa16.31■□□□□ 0.2
SREK1-216ENST00000612404 FREM2Q5SZK8 3169 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 PRAMEF27A3QJZ7 478 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 AQP12BA6NM10 295 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 SERPINA1P01009 418 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 IGKV3-11P04433 115 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 KDELR2P33947 212 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 GABRA3P34903 492 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 DLSTP36957 453 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 STAT5AP42229 794 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 SLC30A8Q8IWU4 369 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 AQP12AQ8IXF9 295 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 ANKFN1Q8N957 763 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 OR1N1Q8NGS0 311 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 PIK3R3Q92569 461 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 VSTM2LQ96N03 204 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 NUDT9Q9BW91 350 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 PIGUQ9H490 435 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 PIEZO1Q92508 2521 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 SAGE2PA6NJ88 616 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 A8MVJ9 347 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 CDRT15L2A8MXV6 281 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 MGRN1O60291 552 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 KRT36O76013 467 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 RHDQ02161 417 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 FUT5Q11128 374 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 DNASE1L3Q13609 305 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 GNA13Q14344 377 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 MYBPC3Q14896 1274 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 OLIG3Q7RTU3 272 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 STACQ99469 402 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 DUSP22Q9NRW4 184 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 WDR70Q9NW82 654 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 LIPT1Q9Y234 373 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 PCDHGB3Q9Y5G1 929 aa16.3■□□□□ 0.2
SREK1-216ENST00000612404 TCRBV3S1A0A5B6 114 aa16.29■□□□□ 0.2
SREK1-216ENST00000612404 H0Y3Z8 333 aa16.29■□□□□ 0.2
SREK1-216ENST00000612404 ZNF682O95780 498 aa16.29■□□□□ 0.2
SREK1-216ENST00000612404 CD82P27701 267 aa16.29■□□□□ 0.2
SREK1-216ENST00000612404 CLCN2P51788 898 aa16.29■□□□□ 0.2
SREK1-216ENST00000612404 CRISP3P54108 245 aa16.29■□□□□ 0.2
SREK1-216ENST00000612404 MAPK11Q15759 364 aa16.29■□□□□ 0.2
SREK1-216ENST00000612404 NNATQ16517 81 aa16.29■□□□□ 0.2
SREK1-216ENST00000612404 MTX3Q5HYI7 312 aa16.29■□□□□ 0.2
SREK1-216ENST00000612404 C10orf67Q8IYJ2 551 aa16.29■□□□□ 0.2
SREK1-216ENST00000612404 AMER2Q8N7J2 671 aa16.29■□□□□ 0.2
SREK1-216ENST00000612404 B3GNT7Q8NFL0 401 aa16.29■□□□□ 0.2
SREK1-216ENST00000612404 GAL3ST4Q96RP7 486 aa16.29■□□□□ 0.2
SREK1-216ENST00000612404 TREX2Q9BQ50 279 aaPredicted RBP16.29■□□□□ 0.2
SREK1-216ENST00000612404 WDR77Q9BQA1 342 aaPredicted RBP16.29■□□□□ 0.2
SREK1-216ENST00000612404 LMF2Q9BU23 707 aaKnown RBP16.29■□□□□ 0.2
SREK1-216ENST00000612404 ITPAQ9BY32 194 aa16.29■□□□□ 0.2
SREK1-216ENST00000612404 ASCL3Q9NQ33 180 aa16.29■□□□□ 0.2
SREK1-216ENST00000612404 DCAF13Q9NV06 445 aaKnown RBP16.29■□□□□ 0.2
SREK1-216ENST00000612404 GIN1Q9NXP7 522 aa16.29■□□□□ 0.2
SREK1-216ENST00000612404 CFL2Q9Y281 166 aa16.29■□□□□ 0.2
SREK1-216ENST00000612404 AK5Q9Y6K8 562 aa16.29■□□□□ 0.2
SREK1-216ENST00000612404 LOC101059948A0A1B0GTJ6 334 aa16.28■□□□□ 0.2
SREK1-216ENST00000612404 TCRBV5S2A0A599 114 aa16.28■□□□□ 0.2
SREK1-216ENST00000612404 C21orf140B9A014 251 aa16.28■□□□□ 0.2
SREK1-216ENST00000612404 GCM2O75603 506 aaPredicted RBP16.28■□□□□ 0.2
SREK1-216ENST00000612404 PGM3O95394 542 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms