RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 AQP7O14520 342 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 LSM1O15116 133 aaKnown RBP11.33□□□□□ -0.6
CBWD3-208ENST00000612050 ZNF354AO60765 605 aaPredicted RBP11.33□□□□□ -0.6
CBWD3-208ENST00000612050 SKAP2O75563 359 aaPredicted RBP11.33□□□□□ -0.6
CBWD3-208ENST00000612050 LYPLA1O75608 230 aaPredicted RBP11.33□□□□□ -0.6
CBWD3-208ENST00000612050 TRAPPC6AO75865 159 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 GLSO94925 669 aaPredicted RBP11.33□□□□□ -0.6
CBWD3-208ENST00000612050 CBX7O95931 251 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 PRPS2P11908 318 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 GABRA1P14867 456 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 S1PR1P21453 382 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 EMDP50402 254 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 MANFP55145 182 aaKnown RBP11.33□□□□□ -0.6
CBWD3-208ENST00000612050 MGAT2Q10469 447 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 CHI3L2Q15782 390 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 TMEM107Q6UX40 140 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 LYPD8Q6UX82 237 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 ACAD11Q709F0 780 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 SZRD1Q7Z422 152 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 EXOC3L1Q86VI1 746 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 DOLPP1Q86YN1 238 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 OR1J4Q8NGS1 313 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 CEP70Q8NHQ1 597 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 CA5BP1Q8WTZ4 195 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 GFM2Q969S9 779 aaKnown RBP11.33□□□□□ -0.6
CBWD3-208ENST00000612050 ZNF764Q96H86 408 aaPredicted RBP11.33□□□□□ -0.6
CBWD3-208ENST00000612050 COL21A1Q96P44 957 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 TSSK3Q96PN8 268 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 BTBD9Q96Q07 612 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 OSBPL11Q9BXB4 747 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 ANGPTL4Q9BY76 406 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 HHATLQ9HCP6 504 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 SH2D2AQ9NP31 389 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 PLSCR2Q9NRY7 297 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 NKIRAS1Q9NYS0 192 aa11.33□□□□□ -0.6
CBWD3-208ENST00000612050 CNOT11Q9UKZ1 510 aaKnown RBP11.33□□□□□ -0.6
CBWD3-208ENST00000612050 KLF2Q9Y5W3 355 aaPredicted RBP11.33□□□□□ -0.6
CBWD3-208ENST00000612050 EML6Q6ZMW3 1958 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 HIVEP3Q5T1R4 2406 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 A0A0G2JMM0 328 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 A0A1W2PPB8 328 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 A0A1W2PRS3 328 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 OR6C70A6NIJ9 312 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 KIR3DP1A8MWS1 328 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 TO15178 435 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 AKAP10O43572 662 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 WDR1O75083 606 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 PEX11AO75192 247 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 IGHG3P01860 377 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 ABCB1P08183 1280 aaPredicted RBP11.32□□□□□ -0.6
CBWD3-208ENST00000612050 HOXD4P09016 255 aaPredicted RBP11.32□□□□□ -0.6
CBWD3-208ENST00000612050 IFI6P09912 130 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 SDC1P18827 310 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 MC3RP41968 323 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 CASP3P42574 277 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 ABCE1P61221 599 aaKnown RBP11.32□□□□□ -0.6
CBWD3-208ENST00000612050 HSPB3Q12988 150 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 KIAA0040Q15053 153 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 DECR1Q16698 335 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 RFTN2Q52LD8 501 aaPredicted RBP11.32□□□□□ -0.6
CBWD3-208ENST00000612050 ZNF585AQ6P3V2 769 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 TMEM64Q6YI46 380 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 Q6ZSR9 355 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 TRILQ7L0X0 811 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 SLC44A2Q8IWA5 706 aaPredicted RBP11.32□□□□□ -0.6
CBWD3-208ENST00000612050 TRIM42Q8IWZ5 723 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 GOLGA6L1Q8N7Z2 621 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 ASB5Q8WWX0 329 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 RND1Q92730 232 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 TMEM41AQ96HV5 264 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 AMDHD1Q96NU7 426 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 ZNF703Q9H7S9 590 aaPredicted RBP11.32□□□□□ -0.6
CBWD3-208ENST00000612050 FOLH1BQ9HBA9 442 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 TNFRSF12AQ9NP84 129 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 ACKR4Q9NPB9 350 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 SDHAF3Q9NRP4 125 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.32□□□□□ -0.6
CBWD3-208ENST00000612050 GPR55Q9Y2T6 319 aaPredicted RBP11.32□□□□□ -0.6
CBWD3-208ENST00000612050 CCL27Q9Y4X3 112 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 PTGDR2Q9Y5Y4 395 aa11.32□□□□□ -0.6
CBWD3-208ENST00000612050 GTF3C1Q12789 2109 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 C15orf38-AP3S2A0A0A6YYH1 394 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 PRAMEF25A6NGN4 478 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 PLOD2O00469 737 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 TBX19O60806 448 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 LRATO95237 230 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 KCNH1O95259 989 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 CLDN1O95832 211 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 RNF224P0DH78 156 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 CREB1P16220 341 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 PTGER4P35408 488 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 ETV4P43268 484 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 SLC1A6P48664 564 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 PNLIPRP2P54317 469 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 PRR5P85299 388 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 DUSP2Q05923 314 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 FOXO1Q12778 655 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 STX3Q13277 289 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 CYP27C1Q4G0S4 372 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 FAM219BQ5XKK7 198 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms