RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 YIPF4Q9BSR8 244 aa16.21■□□□□ 0.19
PPFIA3-207ENST00000602716 AKIRIN1Q9H9L7 192 aaPredicted RBP16.21■□□□□ 0.19
PPFIA3-207ENST00000602716 MAGED1Q9Y5V3 778 aaPredicted RBP16.21■□□□□ 0.19
PPFIA3-207ENST00000602716 hCG_2014768A0A024R1R8 64 aa16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 TMX2-CTNND1H3BSU7 103 aa16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 FGF5P12034 268 aa16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 ELK4P28324 431 aa16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 POLR2IP36954 125 aaKnown RBP16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 ENTPD1P49961 510 aa16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 NEDD8Q15843 81 aa16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 CPZQ66K79 652 aa16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 NIPAL1Q6NVV3 410 aa16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 ENPP6Q6UWR7 440 aa16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 SHISA6Q6ZSJ9 500 aa16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 STK32CQ86UX6 486 aa16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 RAB8BQ92930 207 aa16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 CLIP3Q96DZ5 547 aa16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 C16orf58Q96GQ5 468 aa16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 RDH12Q96NR8 316 aa16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 SLC7A5P2Q9GIP4 190 aa16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 EQTNQ9NQ60 294 aa16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 MAT2BQ9NZL9 334 aa16.21■□□□□ 0.18
PPFIA3-207ENST00000602716 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 HRKO00198 91 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 GSTA4O15217 222 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 ATP1B1P05026 303 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 JUNBP17275 347 aaPredicted RBP16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 NT5EP21589 574 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 PPIBP23284 216 aaKnown RBP16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 IGLV3-21P80748 117 aaPredicted RBP16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 MGAT2Q10469 447 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 TRIP6Q15654 476 aaKnown RBP16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 VMACQ2NL98 169 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 TMEM64Q6YI46 380 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 FKBP9P1Q75LS8 142 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 OLIG3Q7RTU3 272 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 ZNF595Q8IYB9 648 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 AMER2Q8N7J2 671 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 OR52E4Q8NGH9 312 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 OR13F1Q8NGS4 319 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 GIMAP5Q96F15 307 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 MESP1Q9BRJ9 268 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 NAA50Q9GZZ1 169 aaKnown RBP16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 DNAJB9Q9UBS3 223 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 LOXL2Q9Y4K0 774 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 DMXL1Q9Y485 3027 aa16.2■□□□□ 0.18
PPFIA3-207ENST00000602716 TEX51A0A1B0GUA7 166 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 SPAARA0A1B0GVQ0 90 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 CXCR6O00574 342 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 POLR1CO15160 346 aaPredicted RBP16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 CNOT3O75175 753 aaKnown RBP16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 HMGN2P05204 90 aaKnown RBP16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 RORAP35398 523 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 MC2RQ01718 297 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 DUSP8Q13202 625 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 LASP1Q14847 261 aaKnown RBP16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 MYBPC3Q14896 1274 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 EXOSC7Q15024 291 aaKnown RBP16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 ISXQ2M1V0 245 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 MINDY4Q4G0A6 757 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 FHL5Q5TD97 284 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 YOD1Q5VVQ6 348 aaPredicted RBP16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 LAPTM4BQ86VI4 370 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 ZDHHC13Q8IUH4 622 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 FNDC8Q8TC99 324 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 NETO1Q8TDF5 533 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 ADAMTS18Q8TE60 1221 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 SLC35G5Q96KT7 338 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 TOR3AQ9H497 397 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 SEMA3GQ9NS98 782 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 FAF1Q9UNN5 650 aaPredicted RBP16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 MRPS33Q9Y291 106 aaKnown RBP16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 ZFHX2Q9C0A1 2572 aaPredicted RBP16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 A0A1W2PPW3 197 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 PRAMEF27A3QJZ7 478 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 G3V2T6 193 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 CTNSO60931 367 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 CSO75390 466 aaKnown RBP16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 KRT75O95678 551 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 AQP1P29972 269 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 CRYBA2P53672 197 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 ILKQ13418 452 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 MAPK11Q15759 364 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 KIF26BQ2KJY2 2108 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 PRICKLE4Q2TBC4 344 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 GCNT6Q5T4J0 391 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 MFSD4BQ5TF39 518 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 CEACAM20Q6UY09 585 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 THAP5Q7Z6K1 395 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 SFXN5Q8TD22 340 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 NCLNQ969V3 563 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 SLC47A1Q96FL8 570 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 ALOXE3Q9BYJ1 711 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 ASPSCR1Q9BZE9 553 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 ING2Q9H160 280 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 OR51I1Q9H343 314 aa16.19■□□□□ 0.18
PPFIA3-207ENST00000602716 HMGN4O00479 90 aa16.18■□□□□ 0.18
PPFIA3-207ENST00000602716 PFDN1O60925 122 aa16.18■□□□□ 0.18
PPFIA3-207ENST00000602716 GCM2O75603 506 aaPredicted RBP16.18■□□□□ 0.18
PPFIA3-207ENST00000602716 RHAGQ02094 409 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms