RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 NKX6-1P78426 367 aaPredicted RBP9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 GUCY2DQ02846 1103 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 MGAT2Q10469 447 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 GAB1Q13480 694 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 TRMT12Q53H54 448 aaKnown RBP9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 SHEQ5VZ18 495 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 FAM180BQ6P0A1 224 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 SCIMPQ6UWF3 145 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 ZDHHC24Q6UX98 284 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 COMMD6Q7Z4G1 85 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 P4HA3Q7Z4N8 544 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 GRAMD2AQ8IUY3 354 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 GCNT2Q8N0V5 402 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 WDSUB1Q8N9V3 476 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 SIMC1Q8NDZ2 872 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 OR4F6Q8NGB9 312 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 OR52R1Q8NGF1 315 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 TRPC4APQ8TEL6 797 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 SELENOMQ8WWX9 145 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 WNT2BQ93097 391 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 TM4SF18Q96CE8 201 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 KLHL29Q96CT2 875 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 NTNG2Q96CW9 530 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 DTNBP1Q96EV8 351 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 NSUN5Q96P11 429 aaKnown RBP9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 FAIM2Q9BWQ8 316 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 OR2B2Q9GZK3 357 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 ACBD3Q9H3P7 528 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 PIGMQ9H3S5 423 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 ZNF395Q9H8N7 513 aaPredicted RBP9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 ZBTB26Q9HCK0 441 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 BEX4Q9NWD9 120 aaPredicted RBP9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 TAS2R10Q9NYW0 307 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 TMCO1Q9UM00 188 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 PLLPQ9Y342 182 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 ZNF780BQ9Y6R6 833 aa9.6□□□□□ -0.87
CHMP2A-202ENST00000596708 HRNRQ86YZ3 2850 aaPredicted RBP9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 PRR14LQ5THK1 2151 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 STX16-NPEPL1H3BU86 382 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 STX16O14662 325 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 ARHGEF9O43307 516 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 CBX7O95931 251 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 PDYNP01213 254 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 ALDOAP04075 364 aaKnown RBP9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 ATP1B1P05026 303 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 DRD5P21918 477 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 TCEA1P23193 301 aaKnown RBP9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 CHMP24386 653 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 SRD5A2P31213 254 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 PHBP35232 272 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 CPOXP36551 454 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 PPICP45877 212 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 MRPS35P82673 323 aaKnown RBP9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 DUSP2Q05923 314 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 TRAF3Q13114 568 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 LTB4RQ15722 352 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 C10orf62Q5T681 223 aaPredicted RBP9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 AAGABQ6PD74 315 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 CLEC9AQ6UXN8 241 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 RPS27LQ71UM5 84 aaKnown RBP9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 CHMP1BQ7LBR1 199 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 PLCZ1Q86YW0 608 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 P3H2Q8IVL5 708 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 CCDC116Q8IYX3 515 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 TMBIM1Q969X1 311 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 SFXN2Q96NB2 322 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 COL21A1Q96P44 957 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 FARSBQ9NSD9 589 aaKnown RBP9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 NMRK1Q9NWW6 199 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 XPR1Q9UBH6 696 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 ZNF639Q9UID6 485 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 PCTPQ9UKL6 214 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 PYCARDQ9ULZ3 195 aa9.59□□□□□ -0.87
CHMP2A-202ENST00000596708 MAP1AP78559 2803 aaPredicted RBP9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 ROS1P08922 2347 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 A0A1W2PPR1 153 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 ESYT3A0FGR9 886 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 FRG2CA6NGY1 282 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 OR6C70A6NIJ9 312 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 A8MXE2 369 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 PLOD2O00469 737 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 BCAS2O75934 225 aaPredicted RBP9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 SMNDC1O75940 238 aaKnown RBP eCLIP9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 PCSK2P16519 638 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 TSPAN8P19075 237 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 CASQ1P31415 396 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 KRT20P35900 424 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 EMDP50402 254 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 CDH13P55290 713 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 GFRA1P56159 465 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 EEF1A1P68104 462 aaKnown RBP9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 HMGCS1Q01581 520 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 SLC7A5Q01650 507 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 GALNT1Q10472 559 aaPredicted RBP9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 GGTA1PQ4G0N0 100 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 EEF1A1P5Q5VTE0 462 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 OR5M10Q6IEU7 315 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 TAOK1Q7L7X3 1001 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 ADGRE4PQ86SQ3 457 aa9.58□□□□□ -0.88
CHMP2A-202ENST00000596708 SMPDL3BQ92485 455 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms