RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 FCHO1O14526 889 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 TSPAN2O60636 221 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 PRAMEF2O60811 474 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 BCAS2O75934 225 aaPredicted RBP9.75□□□□□ -0.85
LIG1-210ENST00000596332 C1QL1O75973 258 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 CPSF4O95639 269 aaKnown RBP9.75□□□□□ -0.85
LIG1-210ENST00000596332 HMGN2P05204 90 aaKnown RBP9.75□□□□□ -0.85
LIG1-210ENST00000596332 GSNP06396 782 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 ZCCHC18P0CG32 403 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 TNFSF10P50591 281 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 HLCSP50747 726 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 NR0B1P51843 470 aaKnown RBP9.75□□□□□ -0.85
LIG1-210ENST00000596332 PLEKHN1Q494U1 663 aaPredicted RBP9.75□□□□□ -0.85
LIG1-210ENST00000596332 NADK2Q4G0N4 442 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 TIGD2Q4W5G0 525 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 COLEC12Q5KU26 742 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 ANXA8L1Q5VT79 327 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 MSANTD1Q6ZTZ1 278 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 ASB18Q6ZVZ8 466 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 C6orf120Q7Z4R8 191 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 ZAR1Q86SH2 424 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 MTDHQ86UE4 582 aaKnown RBP9.75□□□□□ -0.85
LIG1-210ENST00000596332 SLC5A8Q8N695 610 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 ANKS4BQ8N8V4 417 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 LSM14AQ8ND56 463 aaKnown RBP9.75□□□□□ -0.85
LIG1-210ENST00000596332 OR5L2Q8NGL0 311 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 OR5AK3PQ8NH89 298 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 C9orf43Q8TAL5 461 aaPredicted RBP9.75□□□□□ -0.85
LIG1-210ENST00000596332 MIPOL1Q8TD10 442 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 ZFP90Q8TF47 636 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 HGDQ93099 445 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 SPDL1Q96EA4 605 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 LCORQ96JN0 433 aaPredicted RBP9.75□□□□□ -0.85
LIG1-210ENST00000596332 HES7Q9BYE0 225 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 FAM107BQ9H098 131 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 SLC25A18Q9H1K4 315 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 IKZF5Q9H5V7 419 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 DEPPQ9NTK1 212 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 FBXO34Q9NWN3 711 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 ANKRD10Q9NXR5 420 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 ARMCX1Q9P291 453 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 COPS7AQ9UBW8 275 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 PCDHB14Q9Y5E9 798 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 HRH3Q9Y5N1 445 aa9.75□□□□□ -0.85
LIG1-210ENST00000596332 NUP214P35658 2090 aaPredicted RBP9.75□□□□□ -0.85
LIG1-210ENST00000596332 FRG2CA6NGY1 282 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 CCDC154A6NI56 674 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 ERN1O75460 977 aaKnown RBP9.74□□□□□ -0.85
LIG1-210ENST00000596332 ZIC2O95409 532 aaPredicted RBP9.74□□□□□ -0.85
LIG1-210ENST00000596332 FAM107AO95990 144 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 ABCB1P08183 1280 aaPredicted RBP9.74□□□□□ -0.85
LIG1-210ENST00000596332 FBXO45P0C2W1 286 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 UQCRC2P22695 453 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 ABCD3P28288 659 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 ADSLP30566 484 aaPredicted RBP9.74□□□□□ -0.85
LIG1-210ENST00000596332 PTGDSP41222 190 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 TRPC1P48995 793 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 AP2B1P63010 937 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 FUT5Q11128 374 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 NNATQ16517 81 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 DUSP5Q16690 384 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 COX20Q5RI15 118 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 ABHD17BQ5VST6 288 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 CPLX4Q7Z7G2 160 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 PRR22Q8IZ63 422 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 DPP10Q8N608 796 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 SLC15A4Q8N697 577 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 OR4A15Q8NGL6 344 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 ZFP28Q8NHY6 868 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 SFXN5Q8TD22 340 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 TSPEARQ8WU66 669 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 NEURL3Q96EH8 262 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 OTUB1Q96FW1 271 aaPredicted RBP9.74□□□□□ -0.85
LIG1-210ENST00000596332 SCMH1Q96GD3 660 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 AURKBQ96GD4 344 aaPredicted RBP9.74□□□□□ -0.85
LIG1-210ENST00000596332 UBL7Q96S82 380 aaPredicted RBP9.74□□□□□ -0.85
LIG1-210ENST00000596332 YIPF4Q9BSR8 244 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 RSPO3Q9BXY4 272 aaPredicted RBP9.74□□□□□ -0.85
LIG1-210ENST00000596332 RTN4RQ9BZR6 473 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 ZCCHC3Q9NUD5 404 aaKnown RBP9.74□□□□□ -0.85
LIG1-210ENST00000596332 DDX18Q9NVP1 670 aaKnown RBP9.74□□□□□ -0.85
LIG1-210ENST00000596332 VAPAQ9P0L0 249 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 TRIM33Q9UPN9 1127 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 ZNF451Q9Y4E5 1061 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 NPFFR2Q9Y5X5 522 aa9.74□□□□□ -0.85
LIG1-210ENST00000596332 CHCHD2Q9Y6H1 151 aaPredicted RBP9.74□□□□□ -0.85
LIG1-210ENST00000596332 A0A0G2JMM0 328 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 A0A1W2PPB8 328 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 A0A1W2PRS3 328 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 PINLYPA6NC86 204 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 OR5H15A6NDH6 313 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 KIR3DP1A8MWS1 328 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 FXYD1O00168 92 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 NR5A2O00482 541 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 CDK2AP1O14519 115 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 CFLARO15519 480 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 DYRK3O43781 588 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 SORBS2O94875 1100 aaKnown RBP9.73□□□□□ -0.85
LIG1-210ENST00000596332 UNC5CO95185 931 aa9.73□□□□□ -0.85
LIG1-210ENST00000596332 PRB1P04280 392 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms