RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 RPS6KA2Q15349 733 aa12.44□□□□□ -0.42
SHKBP1-208ENST00000595726 TIGD3Q6B0B8 471 aa12.44□□□□□ -0.42
SHKBP1-208ENST00000595726 DESI1Q6ICB0 168 aa12.44□□□□□ -0.42
SHKBP1-208ENST00000595726 GRHL2Q6ISB3 625 aa12.44□□□□□ -0.42
SHKBP1-208ENST00000595726 ZNF704Q6ZNC4 412 aaPredicted RBP12.44□□□□□ -0.42
SHKBP1-208ENST00000595726 LAS2Q8IYD9 372 aa12.44□□□□□ -0.42
SHKBP1-208ENST00000595726 PRR22Q8IZ63 422 aa12.44□□□□□ -0.42
SHKBP1-208ENST00000595726 TEX9Q8N6V9 391 aa12.44□□□□□ -0.42
SHKBP1-208ENST00000595726 PGM2Q96G03 612 aa12.44□□□□□ -0.42
SHKBP1-208ENST00000595726 RBM18Q96H35 190 aaKnown RBP12.44□□□□□ -0.42
SHKBP1-208ENST00000595726 UCN2Q96RP3 112 aa12.44□□□□□ -0.42
SHKBP1-208ENST00000595726 LYRM4Q9HD34 91 aa12.44□□□□□ -0.42
SHKBP1-208ENST00000595726 CPSF2Q9P2I0 782 aaKnown RBP12.44□□□□□ -0.42
SHKBP1-208ENST00000595726 XPR1Q9UBH6 696 aa12.44□□□□□ -0.42
SHKBP1-208ENST00000595726 FETUBQ9UGM5 382 aa12.44□□□□□ -0.42
SHKBP1-208ENST00000595726 MAPRE3Q9UPY8 281 aa12.44□□□□□ -0.42
SHKBP1-208ENST00000595726 PLOD2O00469 737 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 SIX3O95343 332 aaPredicted RBP12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 CLPSP04118 112 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 POU2F1P14859 743 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 HPDP32754 393 aaPredicted RBP12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 KCNJ5P48544 419 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 SLC37A1P57057 533 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 SIRPAP78324 504 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 IGLV3-21P80748 117 aaPredicted RBP12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 HIST2H2ACQ16777 129 aaPredicted RBP12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 TSNAXIP1Q2TAA8 658 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 HIST2H2AA3Q6FI13 130 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 MED27Q6P2C8 311 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 ANGPTL8Q6UXH0 198 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 RNF111Q6ZNA4 994 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 SH2D5Q6ZV89 423 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 GRAMD2AQ8IUY3 354 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 ACOT4Q8N9L9 421 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 ZNF473Q8WTR7 871 aaKnown RBP12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 UBE2E3Q969T4 207 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 MS4A8Q9BY19 250 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 ACBD3Q9H3P7 528 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 SERHLQ9NQF3 203 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 PSD3Q9NYI0 1048 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 HEY2Q9UBP5 337 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 ANGPTL3Q9Y5C1 460 aa12.43□□□□□ -0.42
SHKBP1-208ENST00000595726 HS3ST1O14792 307 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 KCNAB3O43448 404 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 DYRK3O43781 588 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 ADAM11O75078 769 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 NDUFS7O75251 213 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 PRKRAO75569 313 aaKnown RBP12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 SNRPAP09012 282 aaKnown RBP12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 RBP1P09455 135 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 PCNAP12004 261 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 COL6A2P12110 1019 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 CPN2P22792 545 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 ATP5A1P25705 553 aaKnown RBP12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 IDUAP35475 653 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 KIR2DL2P43627 348 aaPredicted RBP12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 EEF1A1P68104 462 aaKnown RBP12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 OCRLQ01968 901 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 GTF2H2Q13888 395 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 SLC29A2Q14542 456 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 TEX35Q5T0J7 233 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 EEF1A1P5Q5VTE0 462 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 GTF2H2CQ6P1K8 395 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 METTL2BQ6P1Q9 378 aaKnown RBP12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 GOLGA7Q7Z5G4 137 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 TAGAPQ8N103 731 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 ZNF611Q8N823 705 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 PTGR2Q8N8N7 351 aaPredicted RBP12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 EIF1ADQ8N9N8 165 aaKnown RBP12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 ZNF610Q8N9Z0 462 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 OR7G3Q8NG95 312 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 OR1J4Q8NGS1 313 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 OR14L1PQ8NHC6 308 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 UCN3Q969E3 161 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 CTHRC1Q96CG8 243 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 TMEM41AQ96HV5 264 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 SORBS1Q9BX66 1292 aaKnown RBP12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 AMBRA1Q9C0C7 1298 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 KLHL4Q9C0H6 718 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 CDC42EP3Q9UKI2 254 aa12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 TNPO3Q9Y5L0 923 aaKnown RBP12.42□□□□□ -0.42
SHKBP1-208ENST00000595726 C2orf92A0A1B0GVN3 265 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 SAP18O00422 153 aaKnown RBP12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 UGDHO60701 494 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 ALOX15P16050 662 aaPredicted RBP12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 SERPINB1P30740 379 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 SSTR4P31391 388 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 CDKN1AP38936 164 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 PIK3CGP48736 1102 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 LHX2P50458 406 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 C6orf52Q5T4I8 152 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 LIPJQ5W064 366 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 C18orf63Q68DL7 685 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 ENPP6Q6UWR7 440 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 TIFABQ6ZNK6 161 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 P4HA3Q7Z4N8 544 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 MYLK4Q86YV6 388 aaPredicted RBP12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 RNF175Q8N4F7 328 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 MTBPQ96DY7 904 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 PHF21BQ96EK2 531 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms