RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 PRPS1L1P21108 318 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 TACR1P25103 407 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 PIK3CBP42338 1070 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 ASMTP46597 345 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 PHC1P78364 1004 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 TUBA3CQ13748 450 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 SLBPQ14493 270 aaKnown RBP eCLIP11.93□□□□□ -0.5
SCAF1-202ENST00000595242 OR1C1Q15619 314 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 RUNDC3AQ59EK9 446 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 TMEM211Q6ICI0 200 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 SPINK14Q6IE38 97 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 TUBA3EQ6PEY2 450 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.93□□□□□ -0.5
SCAF1-202ENST00000595242 MSRB3Q8IXL7 192 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 KRTCAP2Q8N6L1 136 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 FAM98AQ8NCA5 519 aaKnown RBP11.93□□□□□ -0.5
SCAF1-202ENST00000595242 PAPD5Q8NDF8 572 aaKnown RBP11.93□□□□□ -0.5
SCAF1-202ENST00000595242 OR52E4Q8NGH9 312 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 HUS1BQ8NHY5 278 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 MBD6Q96DN6 1003 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 BTBD9Q96Q07 612 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 SH3GL1Q99961 368 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 KCTD14Q9BQ13 255 aaPredicted RBP11.93□□□□□ -0.5
SCAF1-202ENST00000595242 PITHD1Q9GZP4 211 aaPredicted RBP11.93□□□□□ -0.5
SCAF1-202ENST00000595242 PAIP1Q9H074 479 aaKnown RBP11.93□□□□□ -0.5
SCAF1-202ENST00000595242 ZNF700Q9H0M5 742 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 PCBD2Q9H0N5 130 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 CLEC4MQ9H2X3 399 aaPredicted RBP11.93□□□□□ -0.5
SCAF1-202ENST00000595242 NT5DC2Q9H857 520 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 RMND5AQ9H871 391 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 SERHLQ9NQF3 203 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 LRFN1Q9P244 771 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 MAGEL2Q9UJ55 1249 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 MKL2Q9ULH7 1088 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 SH2B3Q9UQQ2 575 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 GMEB1Q9Y692 573 aa11.93□□□□□ -0.5
SCAF1-202ENST00000595242 MAGEB17A8MXT2 336 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 MYO1DO94832 1006 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 ETHE1O95571 254 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 TPOP07202 933 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 HEXBP07686 556 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 FBLP22087 321 aaKnown RBP11.92□□□□□ -0.5
SCAF1-202ENST00000595242 PTPN6P29350 595 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 SERPINB1P30740 379 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 S100A3P33764 101 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 CD96P40200 585 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 TRPC1P48995 793 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 ST13P50502 369 aaKnown RBP11.92□□□□□ -0.5
SCAF1-202ENST00000595242 VSX2P58304 361 aaPredicted RBP11.92□□□□□ -0.5
SCAF1-202ENST00000595242 RAE1P78406 368 aaKnown RBP11.92□□□□□ -0.5
SCAF1-202ENST00000595242 ACSM2AQ08AH3 577 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 HIST2H2ACQ16777 129 aaPredicted RBP11.92□□□□□ -0.5
SCAF1-202ENST00000595242 SFT2D3Q587I9 215 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 MTX3Q5HYI7 312 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 ACER2Q5QJU3 275 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 CATSPEREQ5SY80 951 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 LPCAT4Q643R3 524 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 ACSM2BQ68CK6 577 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 FCRLBQ6BAA4 426 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 HIST2H2AA3Q6FI13 130 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 GALNTL5Q7Z4T8 443 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 CCDC71Q8IV32 467 aaPredicted RBP11.92□□□□□ -0.5
SCAF1-202ENST00000595242 ZZZ3Q8IYH5 903 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 ADGRG5Q8IZF4 528 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 TMEM178AQ8NBL3 297 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 OR8J2Q8NGG1 315 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 FAM57AQ8TBR7 257 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 RND1Q92730 232 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 ITCHQ96J02 903 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 IMMP1LQ96LU5 166 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 OR52E6Q96RD3 313 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 PKP2Q99959 881 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 CPPED1Q9BRF8 314 aaPredicted RBP11.92□□□□□ -0.5
SCAF1-202ENST00000595242 YIPF2Q9BWQ6 316 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 RAB11FIP5Q9BXF6 653 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 DMRT3Q9NQL9 472 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 FAM120CQ9NX05 1096 aaKnown RBP11.92□□□□□ -0.5
SCAF1-202ENST00000595242 SLC25A37Q9NYZ2 338 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 VAPAQ9P0L0 249 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 CIDEBQ9UHD4 219 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 ADGRE2Q9UHX3 823 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 DTNAQ9Y4J8 743 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 HRH3Q9Y5N1 445 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 SCN3AQ9NY46 2000 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 ZANQ9Y493 2812 aa11.92□□□□□ -0.5
SCAF1-202ENST00000595242 HIVEP2P31629 2446 aa11.91□□□□□ -0.5
SCAF1-202ENST00000595242 ARHGAP21Q5T5U3 1957 aa11.91□□□□□ -0.5
SCAF1-202ENST00000595242 A0A1W2PPV9 198 aa11.91□□□□□ -0.5
SCAF1-202ENST00000595242 DHRS12A0PJE2 317 aa11.91□□□□□ -0.5
SCAF1-202ENST00000595242 FAM220BPB1ANY3 271 aa11.91□□□□□ -0.5
SCAF1-202ENST00000595242 SRPX2O60687 465 aaPredicted RBP11.91□□□□□ -0.5
SCAF1-202ENST00000595242 SCN2BO60939 215 aa11.91□□□□□ -0.5
SCAF1-202ENST00000595242 ZNF24P17028 368 aa11.91□□□□□ -0.5
SCAF1-202ENST00000595242 GGT1P19440 569 aa11.91□□□□□ -0.5
SCAF1-202ENST00000595242 HRH2P25021 359 aa11.91□□□□□ -0.5
SCAF1-202ENST00000595242 PCSK6P29122 969 aa11.91□□□□□ -0.5
SCAF1-202ENST00000595242 TIA1P31483 386 aaKnown RBP eCLIP11.91□□□□□ -0.5
SCAF1-202ENST00000595242 PTGER1P34995 402 aa11.91□□□□□ -0.5
SCAF1-202ENST00000595242 PTGS2P35354 604 aa11.91□□□□□ -0.5
SCAF1-202ENST00000595242 PHEXP78562 749 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms