RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 RPP38P78345 283 aaKnown RBP13.86□□□□□ -0.19
TRIM28-205ENST00000595028 PLCXD2Q0VAA5 305 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 UGT3A2Q3SY77 523 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 SH2D4BQ5SQS7 431 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 BICRALQ6AI39 1079 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 C3P1Q6ZMU1 363 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 NCCRP1Q6ZVX7 275 aaPredicted RBP13.86□□□□□ -0.19
TRIM28-205ENST00000595028 TRILQ7L0X0 811 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 MCEMP1Q8IX19 187 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 DDIASQ8IXT1 998 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 CLYBLQ8N0X4 340 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 OR7G2Q8NG99 324 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 OR6Y1Q8NGX8 325 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 OMA1Q96E52 524 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 ZNF764Q96H86 408 aaPredicted RBP13.86□□□□□ -0.19
TRIM28-205ENST00000595028 VSTM2LQ96N03 204 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 RILPQ96NA2 401 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 BTBD9Q96Q07 612 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 DMRTA2Q96SC8 542 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 VKORC1Q9BQB6 163 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 ANKRA2Q9H9E1 313 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 SSU72Q9NP77 194 aaKnown RBP13.86□□□□□ -0.19
TRIM28-205ENST00000595028 B4GALT7Q9UBV7 327 aa13.86□□□□□ -0.19
TRIM28-205ENST00000595028 PHF3Q92576 2039 aaKnown RBP13.86□□□□□ -0.19
TRIM28-205ENST00000595028 NIPBLQ6KC79 2804 aaeCLIP13.85□□□□□ -0.192e-8■□□□□ 11
TRIM28-205ENST00000595028 A0A1B0GVC2 190 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 OR14I1A6ND48 311 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 AQP7O14520 342 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 TO15178 435 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 TRIM3O75382 744 aaPredicted RBP13.85□□□□□ -0.19
TRIM28-205ENST00000595028 SLITRK5O94991 958 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 JUNP05412 331 aaKnown RBP13.85□□□□□ -0.19
TRIM28-205ENST00000595028 ABCB1P08183 1280 aaPredicted RBP13.85□□□□□ -0.19
TRIM28-205ENST00000595028 RFPL3SP0C7P2 107 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 LINC00032P0C843 101 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 SDC1P18827 310 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 DRD5P21918 477 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 PPICP45877 212 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 SERPINB4P48594 390 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 NCBP2P52298 156 aaKnown RBP eCLIP13.85□□□□□ -0.19
TRIM28-205ENST00000595028 SMSP52788 366 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 ART3Q13508 389 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 XKR7Q5GH72 579 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 CEP85LQ5SZL2 805 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 AGR3Q8TD06 166 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 HGDQ93099 445 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 PKNOX2Q96KN3 472 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 EGLN2Q96KS0 407 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 ZIM3Q96PE6 472 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 ANGPTL4Q9BY76 406 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 STMN4Q9H169 189 aaPredicted RBP13.85□□□□□ -0.19
TRIM28-205ENST00000595028 TP63Q9H3D4 680 aaPredicted RBP13.85□□□□□ -0.19
TRIM28-205ENST00000595028 FOLH1BQ9HBA9 442 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 QPCTLQ9NXS2 382 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 GPR55Q9Y2T6 319 aaPredicted RBP13.85□□□□□ -0.19
TRIM28-205ENST00000595028 TMED5Q9Y3A6 229 aa13.85□□□□□ -0.19
TRIM28-205ENST00000595028 KLF2Q9Y5W3 355 aaPredicted RBP13.85□□□□□ -0.19
TRIM28-205ENST00000595028 FBN3Q75N90 2809 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 A0A087WV62 115 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 PRSS44E7EML9 344 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 NPIPA2E9PIF3 369 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 NPIPA3F8WFD2 350 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 CTIFO43310 598 aaKnown RBP13.84□□□□□ -0.19
TRIM28-205ENST00000595028 HCN1O60741 890 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 COQ9O75208 318 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 NME6O75414 186 aaPredicted RBP13.84□□□□□ -0.19
TRIM28-205ENST00000595028 ERN1O75460 977 aaKnown RBP13.84□□□□□ -0.19
TRIM28-205ENST00000595028 SNX4O95219 450 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 AGAP20933 346 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 MC3RP41968 323 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 CASP3P42574 277 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 MAN2A2P49641 1150 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 CORO7P57737 925 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 PSPHP78330 225 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 ZNF155Q12901 538 aaPredicted RBP13.84□□□□□ -0.19
TRIM28-205ENST00000595028 GALNTL6Q49A17 601 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 TNFAIP8L3Q5GJ75 292 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 EMC4Q5J8M3 183 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 SP5Q6BEB4 398 aaPredicted RBP13.84□□□□□ -0.19
TRIM28-205ENST00000595028 TMEM81Q6P7N7 255 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 XKRXQ6PP77 449 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 TMEM107Q6UX40 140 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 NPSR1Q6W5P4 371 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 CROCCP2Q86T23 111 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 EXOC3L1Q86VI1 746 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 GFM2Q969S9 779 aaKnown RBP13.84□□□□□ -0.19
TRIM28-205ENST00000595028 JSRP1Q96MG2 331 aaPredicted RBP13.84□□□□□ -0.19
TRIM28-205ENST00000595028 AMDHD1Q96NU7 426 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 TSSK3Q96PN8 268 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 CENPHQ9H3R5 247 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 GLIPR2Q9H4G4 154 aa13.84□□□□□ -0.19
TRIM28-205ENST00000595028 PKDREJQ9NTG1 2253 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 BCKDKO14874 412 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 TM9SF1O15321 606 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 PDPK1O15530 556 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 SUSD5O60279 629 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 UGT2B11O75310 529 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 CT45A8P0DMV1 189 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 CT45A9P0DMV2 189 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 ENDOUP21128 410 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms