RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 ABCG4Q9H172 646 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 IRF2BPLQ9H1B7 796 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 C11orf49Q9H6J7 331 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 DDX31Q9H8H2 851 aaKnown RBP12.47□□□□□ -0.41
VRK3-209ENST00000594948 TRIM45Q9H8W5 580 aaPredicted RBP12.47□□□□□ -0.41
VRK3-209ENST00000594948 HMX1Q9NP08 348 aaPredicted RBP12.47□□□□□ -0.41
VRK3-209ENST00000594948 LHX9Q9NQ69 397 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 PAK6Q9NQU5 681 aaPredicted RBP12.47□□□□□ -0.41
VRK3-209ENST00000594948 PRKAG2Q9UGJ0 569 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 CBLCQ9ULV8 474 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 CLCA2Q9UQC9 943 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 LIPT1Q9Y234 373 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 NRG2O14511 850 aaPredicted RBP12.46□□□□□ -0.41
VRK3-209ENST00000594948 EFCAB14O75071 495 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 CPNE3O75131 537 aaKnown RBP12.46□□□□□ -0.41
VRK3-209ENST00000594948 POP7O75817 140 aaKnown RBP12.46□□□□□ -0.41
VRK3-209ENST00000594948 GJA1P17302 382 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 PKLRP30613 574 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 SSTR4P31391 388 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 NUDT1P36639 197 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 HTR2BP41595 481 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 CCR8P51685 355 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 ARFIP1P53367 373 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 ZNF155Q12901 538 aaPredicted RBP12.46□□□□□ -0.41
VRK3-209ENST00000594948 ADAM15Q13444 863 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 IL18Q14116 193 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 CCNJQ5T5M9 372 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 AADACL4Q5VUY2 407 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 HACD4Q5VWC8 232 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 TYW3Q6IPR3 259 aaKnown RBP12.46□□□□□ -0.41
VRK3-209ENST00000594948 BHLHB9Q6PI77 547 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 MARCH9Q86YJ5 346 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 ANKRD53Q8N9V6 530 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 LMNTD1Q8N9Z9 388 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 XAGE5Q8WWM1 108 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 DEDD2Q8WXF8 326 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 SLC9A6Q92581 669 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 NUS1Q96E22 293 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 ARHGDIGQ99819 225 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 BEX2Q9BXY8 128 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 PLA2G12AQ9BZM1 189 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 B3GAT2Q9NPZ5 323 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 CDH10Q9Y6N8 788 aa12.46□□□□□ -0.41
VRK3-209ENST00000594948 A0A087WUU8 490 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 A0A0G2JMP0 313 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 RTCAO00442 366 aaKnown RBP12.46□□□□□ -0.42
VRK3-209ENST00000594948 GABRPO00591 440 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 OR2B3O76000 313 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 FGF19O95750 216 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 RPN2P04844 631 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 ARSBP15848 533 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 HK1P19367 917 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 STAT5AP42229 794 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 GPR1P46091 355 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 CDH11P55287 796 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 GPLD1P80108 840 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 RIPPLY1Q0D2K3 151 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 GRIN2CQ14957 1233 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 ANGPT1Q15389 498 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 P2RY14Q15391 338 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 FAM180BQ6P0A1 224 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 LILRA6Q6PI73 481 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 PAMR1Q6UXH9 720 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 ZNF547Q8IVP9 402 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 OR8D4Q8NGM9 314 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 CYB5D2Q8WUJ1 264 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 AKAP1Q92667 903 aaKnown RBP eCLIP12.46□□□□□ -0.42
VRK3-209ENST00000594948 OSTF1Q92882 214 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 OTULINQ96BN8 352 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 UPRTQ96BW1 309 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 HYLS1Q96M11 299 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 AMDHD1Q96NU7 426 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 IL17FQ96PD4 163 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 GLIPR2Q9H4G4 154 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 EGLN3Q9H6Z9 239 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 FOLH1BQ9HBA9 442 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 NLKQ9UBE8 527 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 TRPC4Q9UBN4 977 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 CCL26Q9Y258 94 aa12.46□□□□□ -0.42
VRK3-209ENST00000594948 A0A0A6YYD5 115 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 FAM170BA6NMN3 283 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 SPINT1O43278 529 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 TMPRSS11DO60235 418 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 IFNA8P32881 189 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 MTNR1BP49286 362 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 INPP1P49441 399 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 BTBD16Q32M84 506 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 FAM209AQ5JX71 171 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 CNKSR3Q6P9H4 555 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 GHDCQ8N2G8 530 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 CADM2Q8N3J6 435 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 NEIL3Q8TAT5 605 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 RAET1EQ8TD07 263 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 SNAPC3Q92966 411 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 MARVELD3Q96A59 401 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 KCTD12Q96CX2 325 aaKnown RBP12.45□□□□□ -0.42
VRK3-209ENST00000594948 OTUB2Q96DC9 234 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 SENP5Q96HI0 755 aaPredicted RBP12.45□□□□□ -0.42
VRK3-209ENST00000594948 ZNF649Q9BS31 505 aa12.45□□□□□ -0.42
VRK3-209ENST00000594948 FAIM2Q9BWQ8 316 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms