RNA–Protein interactions for RNA: ENST00000592960.1

PKN1-215, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-215	ENST00000592960	TLX1	P31314	330 aa	Predicted RBP	13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	WNT3	P56703	355 aa		13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	EEF1A2	Q05639	463 aa	Known RBP	13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	ACTN3	Q08043	901 aa	Predicted RBP	13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	LRRC74A	Q0VAA2	488 aa		13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	CDSN	Q15517	529 aa		13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	H3F3C	Q6NXT2	135 aa		13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	ANKRD46	Q86W74	232 aa		13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	CA13	Q8N1Q1	262 aa		13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	ARHGAP24	Q8N264	748 aa		13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	FAM47B	Q8NA70	645 aa		13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	GTF2H4	Q92759	462 aa		13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	EXOSC8	Q96B26	276 aa	Known RBP	13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	ZNF764	Q96H86	408 aa	Predicted RBP	13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	TREX2	Q9BQ50	279 aa	Predicted RBP	13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	CADM1	Q9BY67	442 aa	Known RBP	13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	ENKD1	Q9H0I2	346 aa		13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	EHD3	Q9NZN3	535 aa		13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	SH3BGRL2	Q9UJC5	107 aa		13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	TINAG	Q9UJW2	476 aa		13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	ACAN	P16112	2415 aa		13.98	□□□□□ -0.17
PKN1-215	ENST00000592960	PRSS51	A0A1B0GVH4	220 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	CFAP73	A6NFT4	308 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	RNASET2	O00584	256 aa	Known RBP	13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	PDPK1	O15530	556 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	PRKRA	O75569	313 aa	Known RBP	13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	ANP32D	O95626	131 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	CPSF4	O95639	269 aa	Known RBP	13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	PGM1	P36871	562 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	RAB38	P57729	211 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	PSME3	P61289	254 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	DMTN	Q08495	405 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	ZNF766	Q5HY98	468 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	C18orf63	Q68DL7	685 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	SPPL2C	Q8IUH8	684 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	OR5T3	Q8NGG3	340 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	LRRC58	Q96CX6	371 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	MMAB	Q96EY8	250 aa	Predicted RBP	13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	GPR137	Q96N19	417 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	HOPX	Q9BPY8	73 aa	Predicted RBP	13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	THTPA	Q9BU02	230 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	CLK4	Q9HAZ1	481 aa	Known RBP	13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	MCCC2	Q9HCC0	563 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	GIMAP4	Q9NUV9	329 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	KCMF1	Q9P0J7	381 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	BTNL2	Q9UIR0	455 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	UTS2R	Q9UKP6	389 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960	MEMO1	Q9Y316	297 aa		13.97	□□□□□ -0.17
PKN1-215	ENST00000592960		A0A096LPI6	279 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	C15orf38-AP3S2	A0A0A6YYH1	394 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	GLOD5	A6NK44	160 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960		H0YIG0	161 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	RFXANK	O14593	260 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	CHST10	O43529	356 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	SCN2B	O60939	215 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	ERN1	O75460	977 aa	Known RBP	13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	CYC1	P08574	325 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	NQO1	P15559	274 aa	Known RBP	13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	EFNA1	P20827	205 aa	Predicted RBP	13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	NTS	P30990	170 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	TRPC1	P48995	793 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	EFNA3	P52797	238 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	KCNJ2	P63252	427 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	PMP22	Q01453	160 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	CAPRIN1	Q14444	709 aa	Known RBP	13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	OR52E8	Q6IFG1	317 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	SLC48A1	Q6P1K1	146 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	ARPIN	Q7Z6K5	226 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	CDH24	Q86UP0	819 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	CLECL1	Q8IZS7	167 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	CCDC115	Q96NT0	180 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	PANX1	Q96RD7	426 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	CSF3R	Q99062	836 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	YIPF2	Q9BWQ6	316 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	SERHL	Q9NQF3	203 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	TAS2R7	Q9NYW3	318 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	HCN3	Q9P1Z3	774 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	PSME2	Q9UL46	239 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	PRPF19	Q9UMS4	504 aa	Known RBP	13.96	□□□□□ -0.17
PKN1-215	ENST00000592960	PCDHGB4	Q9UN71	923 aa		13.96	□□□□□ -0.17
PKN1-215	ENST00000592960		A0A1W2PRB8	838 aa		13.95	□□□□□ -0.18
PKN1-215	ENST00000592960	FXYD1	O00168	92 aa		13.95	□□□□□ -0.18
PKN1-215	ENST00000592960	PGRMC2	O15173	223 aa		13.95	□□□□□ -0.18
PKN1-215	ENST00000592960	DNAJB6	O75190	326 aa		13.95	□□□□□ -0.18
PKN1-215	ENST00000592960	ERAL1	O75616	437 aa	Known RBP	13.95	□□□□□ -0.18
PKN1-215	ENST00000592960	RNH1	P13489	461 aa	Known RBP	13.95	□□□□□ -0.18
PKN1-215	ENST00000592960	HNRNPF	P52597	415 aa	Known RBP	13.95	□□□□□ -0.18
PKN1-215	ENST00000592960	PRSS53	Q2L4Q9	553 aa		13.95	□□□□□ -0.18
PKN1-215	ENST00000592960	ACER2	Q5QJU3	275 aa		13.95	□□□□□ -0.18
PKN1-215	ENST00000592960	LRIF1	Q5T3J3	769 aa		13.95	□□□□□ -0.18
PKN1-215	ENST00000592960	PLAG1	Q6DJT9	500 aa		13.95	□□□□□ -0.18
PKN1-215	ENST00000592960	FAAH2	Q6GMR7	532 aa		13.95	□□□□□ -0.18
PKN1-215	ENST00000592960	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.95	□□□□□ -0.18
PKN1-215	ENST00000592960	DLEU7	Q6UYE1	221 aa		13.95	□□□□□ -0.18
PKN1-215	ENST00000592960	ZC3H7A	Q8IWR0	971 aa	Known RBP	13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms