RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 TUBGCP3Q96CW5 907 aa13.34□□□□□ -0.27
DDX39A-217ENST00000592391 MTERF3Q96E29 417 aa13.34□□□□□ -0.27
DDX39A-217ENST00000592391 OMA1Q96E52 524 aa13.34□□□□□ -0.27
DDX39A-217ENST00000592391 DOHHQ9BU89 302 aa13.34□□□□□ -0.27
DDX39A-217ENST00000592391 DEFB127Q9H1M4 99 aa13.34□□□□□ -0.27
DDX39A-217ENST00000592391 FOLH1BQ9HBA9 442 aa13.34□□□□□ -0.27
DDX39A-217ENST00000592391 ZFP64Q9NPA5 681 aa13.34□□□□□ -0.27
DDX39A-217ENST00000592391 BOKQ9UMX3 212 aaPredicted RBP13.34□□□□□ -0.27
DDX39A-217ENST00000592391 C19orf53Q9UNZ5 99 aaPredicted RBP13.34□□□□□ -0.27
DDX39A-217ENST00000592391 DOPEY1Q5JWR5 2465 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 A0A1B0GTH9 108 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 ZNHIT1O43257 154 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 CDC40O60508 579 aaKnown RBP eCLIP13.33□□□□□ -0.28
DDX39A-217ENST00000592391 NME6O75414 186 aaPredicted RBP13.33□□□□□ -0.28
DDX39A-217ENST00000592391 ERN1O75460 977 aaKnown RBP13.33□□□□□ -0.28
DDX39A-217ENST00000592391 PSMG1O95456 288 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 CT45A8P0DMV1 189 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 CT45A9P0DMV2 189 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 PRPS2P11908 318 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 DDX5P17844 614 aaKnown RBP13.33□□□□□ -0.28
DDX39A-217ENST00000592391 PTGS2P35354 604 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 HPCAL1P37235 193 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 FRKP42685 505 aaPredicted RBP13.33□□□□□ -0.28
DDX39A-217ENST00000592391 MAGEA5P43359 124 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 PSPHP78330 225 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 BST1Q10588 318 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 PDCD2Q16342 344 aaPredicted RBP13.33□□□□□ -0.28
DDX39A-217ENST00000592391 CT45A2Q5DJT8 189 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 IL23RQ5VWK5 629 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 ARHGAP11AQ6P4F7 1023 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 PAOXQ6QHF9 649 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 NUP54Q7Z3B4 507 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 SLC34A3Q8N130 599 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 OR2L13Q8N349 312 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 MGARPQ8TDB4 240 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 CIDECQ96AQ7 238 aaPredicted RBP13.33□□□□□ -0.28
DDX39A-217ENST00000592391 ELP4Q96EB1 424 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 ZBED6CLQ96FA7 236 aaPredicted RBP13.33□□□□□ -0.28
DDX39A-217ENST00000592391 C1orf50Q9BV19 199 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 DDX18Q9NVP1 670 aaKnown RBP13.33□□□□□ -0.28
DDX39A-217ENST00000592391 NKIRAS1Q9NYS0 192 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 SH3BP4Q9P0V3 963 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 SH3BGRL2Q9UJC5 107 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 TINAGQ9UJW2 476 aa13.33□□□□□ -0.28
DDX39A-217ENST00000592391 SPTAN1Q13813 2472 aaKnown RBP13.32□□□□□ -0.28
DDX39A-217ENST00000592391 LRRC3CA6NJW4 275 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 UPK1AO00322 258 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 CCL21O00585 134 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 PRRG2O14669 202 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 SCAMP2O15127 329 aaKnown RBP13.32□□□□□ -0.28
DDX39A-217ENST00000592391 TRIM3O75382 744 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-217ENST00000592391 PDE9AO76083 593 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 SNX4O95219 450 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 IGHG3P01860 377 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 RPL3P39023 403 aaKnown RBP13.32□□□□□ -0.28
DDX39A-217ENST00000592391 CASP3P42574 277 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 CORO7P57737 925 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 EMX2Q04743 252 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 ZNF155Q12901 538 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-217ENST00000592391 HSPB3Q12988 150 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 MAD2L1Q13257 205 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-217ENST00000592391 PTGR1Q14914 329 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 SMU1Q2TAY7 513 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 AGBL2Q5U5Z8 902 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 TMEM198Q66K66 360 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 BICRALQ6AI39 1079 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 MTFR2Q6P444 385 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 TMEM81Q6P7N7 255 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 NPSR1Q6W5P4 371 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 ZNF551Q7Z340 670 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-217ENST00000592391 ZFP28Q8NHY6 868 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 HGDQ93099 445 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 TMBIM1Q969X1 311 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 ZNF597Q96LX8 424 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 RILPQ96NA2 401 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 ANGPTL4Q9BY76 406 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 ZNF703Q9H7S9 590 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-217ENST00000592391 ACSS1Q9NUB1 689 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-217ENST00000592391 SUCOQ9UBS9 1254 aaKnown RBP13.32□□□□□ -0.28
DDX39A-217ENST00000592391 ATP6V1HQ9UI12 483 aa13.32□□□□□ -0.28
DDX39A-217ENST00000592391 EIF3LQ9Y262 564 aaKnown RBP13.32□□□□□ -0.28
DDX39A-217ENST00000592391 OR6C70A6NIJ9 312 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 ZG16O60844 167 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 ABCB7O75027 752 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 UGT2B11O75310 529 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 RFPL3SP0C7P2 107 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 GP1BBP13224 206 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 MANFP55145 182 aaKnown RBP13.31□□□□□ -0.28
DDX39A-217ENST00000592391 PSG6Q00889 435 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 SLC10A1Q14973 349 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 DESI1Q6ICB0 168 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 PACS2Q86VP3 889 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 DOLPP1Q86YN1 238 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 SLC44A2Q8IWA5 706 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-217ENST00000592391 RAB3IL1Q8TBN0 382 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 FAM57AQ8TBR7 257 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 ARL8AQ96BM9 186 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 NTNG2Q96CW9 530 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 SLC35A4Q96G79 324 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 CCDC120Q96HB5 630 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms