RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 SGCZQ96LD1 299 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 BBS4Q96RK4 519 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 TUBB1Q9H4B7 451 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 SLC35C2Q9NQQ7 365 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 CFL2Q9Y281 166 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 CCL27Q9Y4X3 112 aa9.57□□□□□ -0.88
SDF2-208ENST00000589788 ASPDHA6ND91 283 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 CAPN14A8MX76 684 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 NPIPA5E9PKD4 350 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 NPIPB8E9PQR5 432 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 PIP5K1BO14986 540 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 UNC5CO95185 931 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 CLPSP04118 112 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 P04436 131 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 LORP23490 312 aaPredicted RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 NTSP30990 170 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 MPIP34949 423 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 PTGER1P34995 402 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 NR0B1P51843 470 aaKnown RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 TDGF1P3P51864 188 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 NRG3P56975 720 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 KCNK10P57789 538 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 GPR85P60893 370 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 ABCE1P61221 599 aaKnown RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 RPL38P63173 70 aaKnown RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 RBPJQ06330 500 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 EXOSC7Q15024 291 aaKnown RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 KIAA0040Q15053 153 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 LTB4RQ15722 352 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 PRICKLE4Q2TBC4 344 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 UGT3A2Q3SY77 523 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 KRTCAP3Q53RY4 240 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 FAM71E1Q6IPT2 247 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 LRFN4Q6PJG9 635 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 Q6ZSR9 355 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 TICAM1Q8IUC6 712 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 DND1Q8IYX4 353 aaKnown RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 FAM9CQ8IZT9 166 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 ZNF615Q8N8J6 731 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 FAM13CQ8NE31 585 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 OR2T11Q8NH01 316 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 C16orf52Q8NHV5 167 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 TP53INP1Q96A56 240 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 SPACA9Q96E40 222 aaPredicted RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 ZNF681Q96N22 645 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 CCT7Q99832 543 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 SACM1LQ9NTJ5 587 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 THAP1Q9NVV9 213 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 MAT2BQ9NZL9 334 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 ZDHHC2Q9UIJ5 367 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 NPIPA1Q9UND3 350 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 OSGIN2Q9Y236 505 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 TMED5Q9Y3A6 229 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 G3V3Y1 287 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 TFECO14948 347 aaPredicted RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 LSM1O15116 133 aaKnown RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 ZNF354AO60765 605 aaPredicted RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 SKAP2O75563 359 aaPredicted RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 LYPLA1O75608 230 aaPredicted RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 NADKO95544 446 aaPredicted RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 S1PR1P21453 382 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 CNR1P21554 472 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 TACR1P25103 407 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 ARRB2P32121 409 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 RFC3P40938 356 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 SLC1A6P48664 564 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 TMED10P49755 219 aaKnown RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 MRPS35P82673 323 aaKnown RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 OCRLQ01968 901 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 PLGLB1Q02325 96 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 DUSP2Q05923 314 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 MGAT2Q10469 447 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 ZNF791Q3KP31 576 aaPredicted RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 ATP6AP1LQ52LC2 224 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 RFTN2Q52LD8 501 aaPredicted RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 TRMT12Q53H54 448 aaKnown RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 SLC22A10Q63ZE4 541 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 GK5Q6ZS86 529 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 FAM47EQ6ZV65 393 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 OR52R1Q8NGF1 315 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 OR5M3Q8NGP4 307 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 OR9A2Q8NGT5 310 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.56□□□□□ -0.88
SDF2-208ENST00000589788 ZNF675Q8TD23 568 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 KAT2AQ92830 837 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 GFM2Q969S9 779 aaKnown RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 ERP27Q96DN0 273 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 EGLN2Q96KS0 407 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 PPP3R2Q96LZ3 170 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 C7orf26Q96N11 449 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 GPR137Q96N19 417 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 TSSK3Q96PN8 268 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 ZNF317Q96PQ6 595 aaPredicted RBP9.56□□□□□ -0.88
SDF2-208ENST00000589788 FAM173AQ9BQD7 235 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 TAS2R7Q9NYW3 318 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 PRODH2Q9UF12 536 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 ZNF639Q9UID6 485 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 SLC5A6Q9Y289 635 aa9.56□□□□□ -0.88
SDF2-208ENST00000589788 EML6Q6ZMW3 1958 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 ATP6AP2A0A1C7CYW4 349 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms