RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 TM9SF1O15321 606 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 WDR1O75083 606 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 COQ9O75208 318 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 SEC22BO75396 215 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 PSMG1O95456 288 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 CLDN14O95500 239 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 TPOP07202 933 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 BPGMP07738 259 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 ELAVL4P26378 380 aaKnown RBP9.07□□□□□ -0.96
SKA2-208ENST00000583927 FRKP42685 505 aaPredicted RBP9.07□□□□□ -0.96
SKA2-208ENST00000583927 ASMTP46597 345 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 PNLIPRP2P54317 469 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 FBXW4P57775 412 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 MRPS35P82673 323 aaKnown RBP9.07□□□□□ -0.96
SKA2-208ENST00000583927 ZNF844Q08AG5 666 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 LTB4RQ15722 352 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 GXYLT1Q4G148 440 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 GLIPR1L2Q4G1C9 344 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 ARL13AQ5H913 290 aaPredicted RBP9.07□□□□□ -0.96
SKA2-208ENST00000583927 PRAMEF20Q5VT98 475 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 FNDC7Q5VTL7 733 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 SLC30A6Q6NXT4 461 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 PACS2Q86VP3 889 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 TICAM1Q8IUC6 712 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 OR2L13Q8N349 312 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 ACBD4Q8NC06 268 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 SIMC1Q8NDZ2 872 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 OR9A2Q8NGT5 310 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 NEIL3Q8TAT5 605 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 HOXB13Q92826 284 aaPredicted RBP9.07□□□□□ -0.96
SKA2-208ENST00000583927 HGDQ93099 445 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 MTERF3Q96E29 417 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 OMA1Q96E52 524 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 SLC35A4Q96G79 324 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 RILPQ96NA2 401 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 ZIM3Q96PE6 472 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 BBS4Q96RK4 519 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 MECRQ9BV79 373 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 LRTM1Q9HBL6 345 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 MIEF1Q9NQG6 463 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 NTMQ9P121 344 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 SH3BGRL2Q9UJC5 107 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 C19orf53Q9UNZ5 99 aaPredicted RBP9.07□□□□□ -0.96
SKA2-208ENST00000583927 TRAF6Q9Y4K3 522 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 POLR3HQ9Y535 204 aaPredicted RBP9.07□□□□□ -0.96
SKA2-208ENST00000583927 HRH3Q9Y5N1 445 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 PDZD2O15018 2839 aa9.07□□□□□ -0.96
SKA2-208ENST00000583927 PRSS44E7EML9 344 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 BIRC5O15392 142 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 RGS16O15492 202 aaPredicted RBP9.06□□□□□ -0.96
SKA2-208ENST00000583927 CTIFO43310 598 aaKnown RBP9.06□□□□□ -0.96
SKA2-208ENST00000583927 HNRNPRO43390 633 aaKnown RBP9.06□□□□□ -0.96
SKA2-208ENST00000583927 TSPAN2O60636 221 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 SPAG7O75391 227 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 ERN1O75460 977 aaKnown RBP9.06□□□□□ -0.96
SKA2-208ENST00000583927 PDE9AO76083 593 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 HPNP05981 417 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 CHRNGP07510 517 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 RFPL3SP0C7P2 107 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 GABRA1P14867 456 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 CREB1P16220 341 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 DDX5P17844 614 aaKnown RBP9.06□□□□□ -0.96
SKA2-208ENST00000583927 SDC1P18827 310 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 TACR1P25103 407 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 ACVR2AP27037 513 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 COL8A1P27658 744 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 NTSP30990 170 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 PTGER4P35408 488 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 PTGDSP41222 190 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 MAN2A2P49641 1150 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 CDK9P50750 372 aaKnown RBP9.06□□□□□ -0.96
SKA2-208ENST00000583927 PLCXD2Q0VAA5 305 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 PDE7AQ13946 482 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 EFR3AQ14156 821 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 MLC1Q15049 377 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 PRSS53Q2L4Q9 553 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 KRT71Q3SY84 523 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 RFTN2Q52LD8 501 aaPredicted RBP9.06□□□□□ -0.96
SKA2-208ENST00000583927 XKR7Q5GH72 579 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 NHSL2Q5HYW2 709 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 TIGD3Q6B0B8 471 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 SP5Q6BEB4 398 aaPredicted RBP9.06□□□□□ -0.96
SKA2-208ENST00000583927 HIST2H2BCQ6DN03 193 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 FAM180BQ6P0A1 224 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 ACAD11Q709F0 780 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 KIRREL3Q8IZU9 778 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 OR7G2Q8NG99 324 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 OR2T11Q8NH01 316 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 TWIST2Q8WVJ9 160 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 ASB5Q8WWX0 329 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 KAT2AQ92830 837 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 ELP4Q96EB1 424 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 DTNBP1Q96EV8 351 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 PGM2Q96G03 612 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 EGLN2Q96KS0 407 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 AMDHD1Q96NU7 426 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 COL21A1Q96P44 957 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 GLIPR2Q9H4G4 154 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 RUBCNLQ9H714 662 aa9.06□□□□□ -0.96
SKA2-208ENST00000583927 FOLH1BQ9HBA9 442 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms