RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	DET1	Q7L5Y6	550 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	ZNF677	Q86XU0	584 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	PDSS2	Q86YH6	399 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	C10orf67	Q8IYJ2	551 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	MCOLN2	Q8IZK6	566 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	SYCE1	Q8N0S2	351 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	CYP4X1	Q8N118	509 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	ZNF619	Q8N2I2	560 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	GALNT4	Q8N4A0	578 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	GOLGA6L1	Q8N7Z2	621 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	HMGCLL1	Q8TB92	370 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	UBASH3B	Q8TF42	649 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	ATL1	Q8WXF7	558 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	DPF1	Q92782	380 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	KTI12	Q96EK9	354 aa	Predicted RBP	4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	SENP5	Q96HI0	755 aa	Predicted RBP	4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	AJUBA	Q96IF1	538 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	ADGRG7	Q96K78	797 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	ATP6V1G3	Q96LB4	118 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	VRK1	Q99986	396 aa	Predicted RBP	4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	TRIM31	Q9BZY9	425 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	OR2B2	Q9GZK3	357 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	MYNN	Q9NPC7	610 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	SCRT2	Q9NQ03	307 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	WWOX	Q9NZC7	414 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	GPRC5B	Q9NZH0	403 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	CWC15	Q9P013	229 aa	Known RBP	4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	CIDEB	Q9UHD4	219 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	PLAGL1	Q9UM63	463 aa		4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	GPC6	Q9Y625	555 aa	Predicted RBP	4.25	□□□□□ -1.73
MSI2-216	ENST00000582772	FAM187A	A6NFU0	413 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	ADARB2-AS1	A8MUL3	147 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.24	□□□□□ -1.73
MSI2-216	ENST00000582772		B9A039	149 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	DFFA	O00273	331 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	PIP5K1B	O14986	540 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	TP73	O15350	636 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	PRPSAP2	O60256	369 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	GPR137B	O60478	399 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	RDH16	O75452	317 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	ERCC1	P07992	297 aa	Predicted RBP	4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	INAFM2	P0DMQ5	153 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	PPIAL4G	P0DN37	164 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	PKM	P14618	531 aa	Known RBP	4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	CYP11B1	P15538	503 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	ENPP1	P22413	925 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	CD40	P25942	277 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	AOAH	P28039	575 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	GNA15	P30679	374 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	AKT1	P31749	480 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	LSP1	P33241	339 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	MDH1	P40925	334 aa	Known RBP	4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	GPR6	P46095	362 aa	Predicted RBP	4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	TMED10	P49755	219 aa	Known RBP	4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	SEC24C	P53992	1094 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	CDH6	P55285	790 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	DR1	Q01658	176 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	CDR2	Q01850	454 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	DHX9	Q08211	1270 aa	Known RBP	4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	CLEC16A	Q2KHT3	1053 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	FASTKD1	Q53R41	847 aa	Known RBP	4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	PIGG	Q5H8A4	983 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	TIMM23B	Q5SRD1	257 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	C6orf163	Q5TEZ5	329 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	MARC1	Q5VT66	337 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	TMEM214	Q6NUQ4	689 aa	Known RBP	4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	ZNF549	Q6P9A3	640 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	ZNF449	Q6P9G9	518 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	POLN	Q7Z5Q5	900 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	PACS2	Q86VP3	889 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	P2RY8	Q86VZ1	359 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	ADGRG3	Q86Y34	549 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	NDUFA11	Q86Y39	141 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	SBSPON	Q8IVN8	264 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	RHOT2	Q8IXI1	618 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	SLC15A4	Q8N697	577 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	LINC00482	Q8N8I6	264 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	OR2A1	Q8NGT9	310 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	ARRDC2	Q8TBH0	407 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	BCAS4	Q8TDM0	211 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	ZNF473	Q8WTR7	871 aa	Known RBP	4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	UBLCP1	Q8WVY7	318 aa	Predicted RBP	4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.24	□□□□□ -1.73	1e-6	■■■■■ 44.9
MSI2-216	ENST00000582772	RERG	Q96A58	199 aa	Predicted RBP	4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	ULK4	Q96C45	1275 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	TLCD1	Q96CP7	247 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	R3HDM4	Q96D70	268 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	RAB39B	Q96DA2	213 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	FBXO17	Q96EF6	278 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	PEX11G	Q96HA9	241 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	TMEM41A	Q96HV5	264 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	TRIB3	Q96RU7	358 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	ERP44	Q9BS26	406 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	ADGRE3	Q9BY15	652 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	PLK3	Q9H4B4	646 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	SYNC	Q9H7C4	482 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms