RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 CTAGE4Q8IX94 777 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 GCNT2Q8N0V5 402 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 CDYL2Q8N8U2 506 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 OR9A2Q8NGT5 310 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 OR14L1PQ8NHC6 308 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 FAM222BQ8WU58 562 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 ISL2Q96A47 359 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 EXOSC8Q96B26 276 aaKnown RBP8.13□□□□□ -1.11
GGA3-207ENST00000578896 INTS12Q96CB8 462 aaKnown RBP8.13□□□□□ -1.11
GGA3-207ENST00000578896 HSPBAP1Q96EW2 488 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 POM121Q96HA1 1249 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 ZNF681Q96N22 645 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 SECISBP2Q96T21 854 aaKnown RBP8.13□□□□□ -1.11
GGA3-207ENST00000578896 MRPL57Q9BQC6 102 aaKnown RBP8.13□□□□□ -1.11
GGA3-207ENST00000578896 CXXC4Q9H2H0 198 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 SLC24A3Q9HC58 644 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 ZNF629Q9UEG4 869 aaPredicted RBP8.13□□□□□ -1.11
GGA3-207ENST00000578896 MTRF1LQ9UGC7 380 aaKnown RBP8.13□□□□□ -1.11
GGA3-207ENST00000578896 ZNF639Q9UID6 485 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 FBXL2Q9UKC9 423 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 ADAM29Q9UKF5 820 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 UTS2RQ9UKP6 389 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 DLGAP4Q9Y2H0 992 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 PCDHGB3Q9Y5G1 929 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 IKBKGQ9Y6K9 419 aa8.13□□□□□ -1.11
GGA3-207ENST00000578896 A0A1W2PPR1 153 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 CCDC189A1A4V9 331 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 MBD3L4A6NDZ8 208 aaPredicted RBP8.12□□□□□ -1.11
GGA3-207ENST00000578896 MBD3L3A6NE82 208 aaPredicted RBP8.12□□□□□ -1.11
GGA3-207ENST00000578896 PRAMEF25A6NGN4 478 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 GOLGA6L10A6NI86 522 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 MBD3L5A6NJ08 208 aaPredicted RBP8.12□□□□□ -1.11
GGA3-207ENST00000578896 CD8B2A6NJW9 211 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 H0Y3Z8 333 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 SUPT7LO94864 414 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 OTCP00480 354 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 ATP1B1P05026 303 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 EPXP11678 715 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 CYP4B1P13584 511 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 ECHS1P30084 290 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 PPP2R2AP63151 447 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 RAE1P78406 368 aaKnown RBP8.12□□□□□ -1.11
GGA3-207ENST00000578896 HMGCS1Q01581 520 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 CLCQ05315 142 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 CKAP4Q07065 602 aaKnown RBP8.12□□□□□ -1.11
GGA3-207ENST00000578896 TSNAXIP1Q2TAA8 658 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 FBXL19-AS1Q494R0 122 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 GGTA1PQ4G0N0 100 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 ZNF628Q5EBL2 1059 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 NHSL2Q5HYW2 709 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 SLC30A6Q6NXT4 461 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 METTL2BQ6P1Q9 378 aaKnown RBP8.12□□□□□ -1.11
GGA3-207ENST00000578896 NPSR1Q6W5P4 371 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 Q71RC1 249 aaPredicted RBP8.12□□□□□ -1.11
GGA3-207ENST00000578896 PM20D2Q8IYS1 436 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 OR4N2Q8NGD1 307 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 MBD3L2Q8NHZ7 208 aaPredicted RBP8.12□□□□□ -1.11
GGA3-207ENST00000578896 ZNF592Q92610 1267 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 CTHRC1Q96CG8 243 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 APIPQ96GX9 242 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 C16orf45Q96MC5 204 aaPredicted RBP8.12□□□□□ -1.11
GGA3-207ENST00000578896 KCNA7Q96RP8 456 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 ADOQ96SZ5 270 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 G6PC3Q9BUM1 346 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 RBM24Q9BX46 236 aaKnown RBP8.12□□□□□ -1.11
GGA3-207ENST00000578896 EBPLQ9BY08 206 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 FUT8Q9BYC5 575 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 MRPL46Q9H2W6 279 aaKnown RBP8.12□□□□□ -1.11
GGA3-207ENST00000578896 TMEM216Q9P0N5 145 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 SNX6Q9UNH7 406 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 EXO1Q9UQ84 846 aaKnown RBP8.12□□□□□ -1.11
GGA3-207ENST00000578896 RPH3AQ9Y2J0 694 aaPredicted RBP8.12□□□□□ -1.11
GGA3-207ENST00000578896 TIMM22Q9Y584 194 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 ZNF780BQ9Y6R6 833 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 FN1P02751 2386 aaKnown RBP8.12□□□□□ -1.11
GGA3-207ENST00000578896 DSCAMO60469 2012 aa8.12□□□□□ -1.11
GGA3-207ENST00000578896 CLCA1A8K7I4 914 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 H0YC42 278 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 GOLGA8RI6L899 631 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 DLX3O60479 287 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 GUCY1B2O75343 617 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 CBR3O75828 277 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 TGM6O95932 706 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 COL6A2P12110 1019 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 NAGAP17050 411 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 HOXB4P17483 251 aaPredicted RBP8.11□□□□□ -1.11
GGA3-207ENST00000578896 DRD5P21918 477 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 GCAP28676 217 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 OPRM1P35372 400 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 PPICP45877 212 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 SERPINB9P50453 376 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 TPD52P55327 224 aaPredicted RBP8.11□□□□□ -1.11
GGA3-207ENST00000578896 ADAM8P78325 824 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 RCAN2Q14206 197 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 DAZAP2Q15038 168 aaPredicted RBP8.11□□□□□ -1.11
GGA3-207ENST00000578896 ZNF678Q5SXM1 525 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 PAMR1Q6UXH9 720 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 C17orf47Q8NEP4 570 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 WFDC11Q8NEX6 87 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 OR5M1Q8NGP8 315 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms