RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 KIR2DL2P43627 348 aaPredicted RBP8.13□□□□□ -1.11
SMG6-218ENST00000575454 PPICP45877 212 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 MRPS22P82650 360 aaKnown RBP8.13□□□□□ -1.11
SMG6-218ENST00000575454 KRTAP1-1Q07627 177 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 MAP4K2Q12851 820 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 VEZF1Q14119 521 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 EFR3AQ14156 821 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 CAPRIN1Q14444 709 aaKnown RBP8.13□□□□□ -1.11
SMG6-218ENST00000575454 OR4D1Q15615 310 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 CHRFAM7AQ494W8 412 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 VWA1Q6PCB0 445 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 PAGE2Q7Z2X7 111 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 UBTD2Q8WUN7 234 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 ZC3HAV1LQ96H79 300 aaKnown RBP8.13□□□□□ -1.11
SMG6-218ENST00000575454 UBXN10Q96LJ8 280 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 COL21A1Q96P44 957 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 NODALQ96S42 347 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 MCMBPQ9BTE3 642 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 ZNF717Q9BY31 904 aaPredicted RBP8.13□□□□□ -1.11
SMG6-218ENST00000575454 REG4Q9BYZ8 158 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 KLHL4Q9C0H6 718 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 RNF122Q9H9V4 155 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 NMRAL1Q9HBL8 299 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 AHSPQ9NZD4 102 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 BCAP29Q9UHQ4 241 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 PSME2Q9UL46 239 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 PROCRQ9UNN8 238 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 MTO1Q9Y2Z2 717 aaKnown RBP8.13□□□□□ -1.11
SMG6-218ENST00000575454 ZNF175Q9Y473 711 aa8.13□□□□□ -1.11
SMG6-218ENST00000575454 UQCRHLA0A096LP55 91 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.12□□□□□ -1.11
SMG6-218ENST00000575454 CCDC189A1A4V9 331 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 SYCE1LA8MT33 242 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 EFCAB8A8MWE9 144 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 KLF4O43474 513 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 ZIC3O60481 467 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 UGT2B11O75310 529 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 BCAS2O75934 225 aaPredicted RBP8.12□□□□□ -1.11
SMG6-218ENST00000575454 SEMA3DO95025 777 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 CGAP01215 116 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 ATP1B1P05026 303 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 FESP07332 822 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 CT62P0C5K7 136 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 CSNK2A2P19784 350 aaPredicted RBP8.12□□□□□ -1.11
SMG6-218ENST00000575454 S1PR1P21453 382 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 CNTFP26441 200 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 DPP4P27487 766 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 CCKARP32238 428 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 DEKP35659 375 aaKnown RBP8.12□□□□□ -1.11
SMG6-218ENST00000575454 PIK3CGP48736 1102 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 DSCR4P56555 118 aaPredicted RBP8.12□□□□□ -1.11
SMG6-218ENST00000575454 RAB10P61026 200 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 RPS3AP61247 264 aaKnown RBP8.12□□□□□ -1.11
SMG6-218ENST00000575454 C10orf62Q5T681 223 aaPredicted RBP8.12□□□□□ -1.11
SMG6-218ENST00000575454 PLXDC2Q6UX71 529 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 FAM214BQ7L5A3 538 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 ZNF550Q7Z398 422 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 TEX9Q8N6V9 391 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 ZNF610Q8N9Z0 462 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 FBXO36Q8NEA4 188 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 ADCY4Q8NFM4 1077 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 OR4K17Q8NGC6 315 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 EXT2Q93063 718 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 GFM2Q969S9 779 aaKnown RBP8.12□□□□□ -1.11
SMG6-218ENST00000575454 GTPBP3Q969Y2 492 aaKnown RBP8.12□□□□□ -1.11
SMG6-218ENST00000575454 SERPINI1Q99574 410 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 PIGQQ9BRB3 760 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 ITPAQ9BY32 194 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 OR10A4Q9H209 315 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 CAB39LQ9H9S4 337 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 YAE1D1Q9NRH1 226 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 STOML1Q9UBI4 398 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 ADAM29Q9UKF5 820 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 LAMP3Q9UQV4 416 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 WIF1Q9Y5W5 379 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 SNX8Q9Y5X2 465 aa8.12□□□□□ -1.11
SMG6-218ENST00000575454 C1orf226A1L170 272 aa8.11□□□□□ -1.11
SMG6-218ENST00000575454 A8MV72 311 aaPredicted RBP8.11□□□□□ -1.11
SMG6-218ENST00000575454 SUPT3HB4E1H0 165 aa8.11□□□□□ -1.11
SMG6-218ENST00000575454 PHGDHO43175 533 aaKnown RBP8.11□□□□□ -1.11
SMG6-218ENST00000575454 PHF1O43189 567 aaPredicted RBP8.11□□□□□ -1.11
SMG6-218ENST00000575454 KERAO60938 352 aa8.11□□□□□ -1.11
SMG6-218ENST00000575454 SUPT3HO75486 399 aa8.11□□□□□ -1.11
SMG6-218ENST00000575454 REM1O75628 298 aa8.11□□□□□ -1.11
SMG6-218ENST00000575454 NID1P14543 1247 aa8.11□□□□□ -1.11
SMG6-218ENST00000575454 IVDP26440 423 aa8.11□□□□□ -1.11
SMG6-218ENST00000575454 CRABP2P29373 138 aa8.11□□□□□ -1.11
SMG6-218ENST00000575454 NEK2P51955 445 aa8.11□□□□□ -1.11
SMG6-218ENST00000575454 SIRPAP78324 504 aa8.11□□□□□ -1.11
SMG6-218ENST00000575454 PDIA2Q13087 525 aaKnown RBP8.11□□□□□ -1.11
SMG6-218ENST00000575454 GANABQ14697 944 aaKnown RBP8.11□□□□□ -1.11
SMG6-218ENST00000575454 SLMAPQ14BN4 828 aa8.11□□□□□ -1.11
SMG6-218ENST00000575454 NNATQ16517 81 aa8.11□□□□□ -1.11
SMG6-218ENST00000575454 ANKRD34AQ69YU3 496 aa8.11□□□□□ -1.11
SMG6-218ENST00000575454 ADAM5Q6NVV9 412 aa8.11□□□□□ -1.11
SMG6-218ENST00000575454 METTL2BQ6P1Q9 378 aaKnown RBP8.11□□□□□ -1.11
SMG6-218ENST00000575454 TBC1D1Q86TI0 1168 aaPredicted RBP8.11□□□□□ -1.11
SMG6-218ENST00000575454 ISCA2Q86U28 154 aa8.11□□□□□ -1.11
SMG6-218ENST00000575454 ANKMY2Q8IV38 441 aa8.11□□□□□ -1.11
SMG6-218ENST00000575454 UBQLNLQ8IYU4 475 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms