RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 COL6A6A6NMZ7 2263 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 C2orf92A0A1B0GVN3 265 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 BBIP1A8MTZ0 92 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 ATXN7O15265 892 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 CBX6O95503 412 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 C1QCP02747 245 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 CLPSP04118 112 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 ZCCHC18P0CG32 403 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 PTPN6P29350 595 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 CHI3L1P36222 383 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 CPA2P48052 419 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 EMDP50402 254 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 SSR4P51571 173 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 CASP9P55211 416 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 DCAF7P61962 342 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 ARG2P78540 354 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 PRR5P85299 388 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 DUSP8Q13202 625 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 ART3Q13508 389 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 TP53BP2Q13625 1128 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 LY6DQ14210 128 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 EBPQ15125 230 aaKnown RBP11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 GTDC1Q4AE62 458 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 LRIF1Q5T3J3 769 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 BHLHB9Q6PI77 547 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 TMEM64Q6YI46 380 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 TAGAPQ8N103 731 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 TMEM156Q8N614 296 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 DNAJB8Q8NHS0 232 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 SLC22A8Q8TCC7 542 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 MOAP1Q96BY2 351 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 C16orf58Q96GQ5 468 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 PHF12Q96QT6 1004 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 SLC35A5Q9BS91 424 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 YIPF4Q9BSR8 244 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 WWTR1Q9GZV5 400 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 LIN28AQ9H9Z2 209 aaKnown RBP11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 EQTNQ9NQ60 294 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 RYDENQ9NUL5 291 aaKnown RBP11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 GID8Q9NWU2 228 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 NTMQ9P121 344 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 MYOTQ9UBF9 498 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 BOD1L1Q8NFC6 3051 aa11.95□□□□□ -0.5
NPLOC4-214ENST00000573876 RNF103-CHMP3A0A140T963 221 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 CLIC1O00299 241 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 WWP2O00308 870 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 PRKNO60260 465 aaPredicted RBP11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 ITGA10O75578 1167 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 NPPAP01160 153 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 HMGN2P05204 90 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 T-ENOLP0DO92 83 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 MATN1P21941 496 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 NRG3P56975 720 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 OC90Q02509 493 aaPredicted RBP11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 ZNF155Q12901 538 aaPredicted RBP11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 CAPRIN1Q14444 709 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 ZNHIT3Q15649 155 aaPredicted RBP11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 COQ5Q5HYK3 327 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 IGFL2Q6UWQ7 119 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 ANGPTL8Q6UXH0 198 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 DHDDSQ86SQ9 333 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 C9orf40Q8IXQ3 194 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 BEST3Q8N1M1 668 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 ARMC10Q8N2F6 343 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 HORMAD2Q8N7B1 307 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 TEX19Q8NA77 164 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 OR56A1Q8NGH5 318 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 C16orf52Q8NHV5 167 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 SFXN5Q8TD22 340 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 ASB15Q8WXK1 588 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 TP53INP1Q96A56 240 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 LRRC58Q96CX6 371 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 AURKBQ96GD4 344 aaPredicted RBP11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 UTP23Q9BRU9 249 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 RNF32Q9H0A6 362 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 TPT1P8Q9HAU6 139 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 SLC25A37Q9NYZ2 338 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 PLA2G3Q9NZ20 509 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 VAPAQ9P0L0 249 aa11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 HEMK1Q9Y5R4 338 aaPredicted RBP11.94□□□□□ -0.5
NPLOC4-214ENST00000573876 KALRNO60229 2985 aa11.93□□□□□ -0.5
NPLOC4-214ENST00000573876 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.93□□□□□ -0.5
NPLOC4-214ENST00000573876 OR5H15A6NDH6 313 aa11.93□□□□□ -0.5
NPLOC4-214ENST00000573876 TTC36A6NLP5 189 aa11.93□□□□□ -0.5
NPLOC4-214ENST00000573876 EIF4E1BA6NMX2 242 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-214ENST00000573876 B2RBV5 119 aa11.93□□□□□ -0.5
NPLOC4-214ENST00000573876 UBOX5O94941 541 aa11.93□□□□□ -0.5
NPLOC4-214ENST00000573876 UNC5CO95185 931 aa11.93□□□□□ -0.5
NPLOC4-214ENST00000573876 KRT75O95678 551 aa11.93□□□□□ -0.5
NPLOC4-214ENST00000573876 WDPCPO95876 746 aa11.93□□□□□ -0.5
NPLOC4-214ENST00000573876 NUDT2P50583 147 aa11.93□□□□□ -0.5
NPLOC4-214ENST00000573876 NR0B1P51843 470 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-214ENST00000573876 MNAT1P51948 309 aa11.93□□□□□ -0.5
NPLOC4-214ENST00000573876 GAB1Q13480 694 aa11.93□□□□□ -0.5
NPLOC4-214ENST00000573876 LASP1Q14847 261 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-214ENST00000573876 RUNDC3AQ59EK9 446 aa11.93□□□□□ -0.5
NPLOC4-214ENST00000573876 PIGGQ5H8A4 983 aa11.93□□□□□ -0.5
NPLOC4-214ENST00000573876 SAXO2Q658L1 398 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms