RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 SPATA9Q9BWV2 254 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 ACTRT3Q9BYD9 372 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 SPRY4Q9C004 299 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 TRIM15Q9C019 465 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR10A5Q9H207 317 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 NANOGQ9H9S0 305 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZNF160Q9HCG1 818 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 Q9N2J8 555 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC52A3Q9NQ40 469 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 SIRT3Q9NTG7 399 aaPredicted RBP6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 EXD2Q9NVH0 621 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC25A37Q9NYZ2 338 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 P2RX2Q9UBL9 471 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 FBXL4Q9UKA2 621 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 C19orf53Q9UNZ5 99 aaPredicted RBP6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 ANGPT4Q9Y264 503 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 PCDHGB3Q9Y5G1 929 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 HS3ST3B1Q9Y662 390 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 MRPS18BQ9Y676 258 aaKnown RBP6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 DNAH14Q0VDD8 3507 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 ASCC3Q8N3C0 2202 aaKnown RBP6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 KNL1Q8NG31 2342 aa6.13□□□□□ -1.43
CTDNEP1-204ENST00000570484 LOC102723996A0A087X1L8 192 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 TRBV5-3A0A0A0MS03 114 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 C2orf92A0A1B0GVN3 265 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 DUXAA6NLW8 204 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 FAM220BPB1ANY3 271 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 KLK10O43240 276 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 ASNA1O43681 348 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 PDE5AO76074 875 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 SOX30O94993 753 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 AK1P00568 194 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 PDGFAP04085 211 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 BCHEP06276 602 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 CT62P0C5K7 136 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 T-ENOLP0DO92 83 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 PRKAR1AP10644 381 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 ICAM2P13598 275 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 TCN1P20061 433 aaPredicted RBP6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 ATP6V1C1P21283 382 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 MATN1P21941 496 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC6A2P23975 617 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 PTPN6P29350 595 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 IL12BP29460 328 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 MAGEA8P43361 318 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 RFX3P48380 749 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 TMED10P49755 219 aaKnown RBP6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 CLCN2P51788 898 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 PSMD4P55036 377 aaKnown RBP6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 NRG3P56975 720 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 EEFSECP57772 596 aaKnown RBP6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 DSTNP60981 165 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 DCAF7P61962 342 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 PSPHP78330 225 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 LIPEQ05469 1076 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 PLCXD2Q0VAA5 305 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 FUT7Q11130 342 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 BNIP2Q12982 314 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 IL10RAQ13651 578 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 PCOLCEQ15113 449 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 RGNQ15493 299 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 NNATQ16517 81 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 SPATS1Q496A3 300 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 RUNDC3AQ59EK9 446 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 INTS11Q5TA45 600 aaKnown RBP6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 PLAG1Q6DJT9 500 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 MFSD12Q6NUT3 480 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 CDC73Q6P1J9 531 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 ERICH5Q6P6B1 374 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZCCHC12Q6PEW1 402 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 DLEU7Q6UYE1 221 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 DGAT2L6Q6ZPD8 337 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 PPP1R32Q7Z5V6 425 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 IFNEQ86WN2 208 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC44A2Q8IWA5 706 aaPredicted RBP6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC30A8Q8IWU4 369 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 MSRB3Q8IXL7 192 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 TAGAPQ8N103 731 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 LGI4Q8N135 537 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 KIF2BQ8N4N8 673 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC5A8Q8N695 610 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 C11orf65Q8NCR3 313 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR11G2Q8NGC1 345 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR5D16Q8NGK9 328 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR5L2Q8NGL0 311 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR1N1Q8NGS0 311 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 OR10A6Q8NH74 314 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC22A8Q8TCC7 542 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 DOK4Q8TEW6 326 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 PTPMT1Q8WUK0 201 aaPredicted RBP6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 CTHRC1Q96CG8 243 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 SENP5Q96HI0 755 aaPredicted RBP6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 LRGUKQ96M69 825 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 FER1L6-AS2Q96M78 137 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 CDRT15Q96T59 188 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 YIPF4Q9BSR8 244 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 THTPAQ9BU02 230 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 DEFB126Q9BYW3 111 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 DPH1Q9BZG8 443 aa6.12□□□□□ -1.43
CTDNEP1-204ENST00000570484 GSX2Q9BZM3 304 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms