RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 CLINT1Q14677 625 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CACUL1Q86Y37 369 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 PYROXD2Q8N2H3 581 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 FAM71E2Q8N5Q1 922 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 COMMD1Q8N668 190 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 TEX47Q8TBZ9 253 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 GTF3AQ92664 365 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 RNF166Q96A37 237 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 CXorf58Q96LI9 332 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 JSRP1Q96MG2 331 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 FDXACB1Q9BRP7 624 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 MED18Q9BUE0 208 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CRB3Q9BUF7 120 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 RBCK1Q9BYM8 510 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 NDUFB11Q9NX14 153 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 LYARQ9NX58 379 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 KIAA1217Q5T5P2 1943 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 A0A1B0GVI7 797 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ZNF705FA8MVS1 300 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 PPM1DO15297 605 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 PAK4O96013 591 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 ZNF705DP0CH99 300 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 ZNF705BP0CI00 300 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 TAP2Q03519 686 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 HABP2Q14520 560 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 CYB5RLQ6IPT4 315 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 TRIM40Q6P9F5 258 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ARHGAP12Q8IWW6 846 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 LINC00471Q8N535 108 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CAMKVQ8NCB2 501 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ZNF540Q8NDQ6 660 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 OR2T4Q8NH00 348 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 SNX33Q8WV41 574 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 NUDT8Q8WV74 236 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 RAB37Q96AX2 223 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 H2AFJQ9BTM1 129 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 MENTQ9BUN1 341 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 TPT1P8Q9HAU6 139 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 SSR3Q9UNL2 185 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 STARD10Q9Y365 291 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 BACE2Q9Y5Z0 518 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 PLSCR5A0PG75 271 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ZNF705EA8MWA4 302 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 C1orf196B1AJZ1 125 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 DOK2O60496 412 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 POP7O75817 140 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 AKR7A3O95154 331 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 HEXAP06865 529 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 HIST1H2AGP0C0S8 130 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 SPI1P17947 270 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 HIST1H2ADP20671 130 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 S100PP25815 95 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 DCDP81605 110 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 IL10RBQ08334 325 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 PTGR1Q14914 329 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 INO80DQ53TQ3 878 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 TCEAL5Q5H9L2 206 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 LYRM7Q5U5X0 104 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 RAB11FIP2Q7L804 512 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ADGRD2Q7Z7M1 963 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 BRIX1Q8TDN6 353 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 ZDHHC1Q8WTX9 485 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 HIST1H2AHQ96KK5 128 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 C5orf34Q96MH7 638 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 HIST1H2AJQ99878 128 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 INPP5KQ9BT40 448 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 SLC29A3Q9BZD2 475 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 AP5M1Q9H0R1 490 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 DNTTIP1Q9H147 329 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 RGCCQ9H4X1 137 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 MID1IP1Q9NPA3 183 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 GPR83Q9NYM4 423 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 PDP1Q9P0J1 537 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 HEBP2Q9Y5Z4 205 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 TRIP11Q15643 1979 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 OTOL1A6NHN0 477 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 MANSC4A6NHS7 340 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 M0QYV0 167 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ZNF593O00488 134 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 CD3EAPO15446 510 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 DPM1O60762 260 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 EIF3GO75821 320 aaKnown RBP eCLIP2.77□□□□□ -1.97
CHD9-218ENST00000566029 CYP17A1P05093 508 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CBSLP0DN79 551 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CD8BP10966 210 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 RHCEP18577 417 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ATP5A1P25705 553 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 CBSP35520 551 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 LCP2Q13094 533 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 OLIG2Q13516 323 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 PKDCCQ504Y2 493 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ADGRF1Q5T601 910 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 KCTD9Q7L273 389 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 OR4D6Q8NGJ1 314 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ZNF596Q8TC21 504 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 NTAN1Q96AB6 310 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ECHDC3Q96DC8 303 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 OR2M4Q96R27 311 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 TAAR1Q96RJ0 339 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 FUZQ9BT04 418 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms