RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 MARCKSP29966 332 aaPredicted RBP2.95□□□□□ -1.94
PALB2-203ENST00000565038 XCR1P46094 333 aa2.95□□□□□ -1.94
PALB2-203ENST00000565038 PPP1R8Q12972 351 aaKnown RBP2.95□□□□□ -1.94
PALB2-203ENST00000565038 BTG3Q14201 252 aaPredicted RBP2.95□□□□□ -1.94
PALB2-203ENST00000565038 SMC1AQ14683 1233 aaKnown RBP2.95□□□□□ -1.94
PALB2-203ENST00000565038 HFEQ30201 348 aa2.95□□□□□ -1.94
PALB2-203ENST00000565038 CWC27Q6UX04 472 aaKnown RBP2.95□□□□□ -1.94
PALB2-203ENST00000565038 TSEN54Q7Z6J9 526 aaKnown RBP2.95□□□□□ -1.94
PALB2-203ENST00000565038 ZNF677Q86XU0 584 aa2.95□□□□□ -1.94
PALB2-203ENST00000565038 GPR137CQ8N3F9 429 aa2.95□□□□□ -1.94
PALB2-203ENST00000565038 MLKLQ8NB16 471 aa2.95□□□□□ -1.94
PALB2-203ENST00000565038 OR13F1Q8NGS4 319 aa2.95□□□□□ -1.94
PALB2-203ENST00000565038 ZNF564Q8TBZ8 553 aaPredicted RBP2.95□□□□□ -1.94
PALB2-203ENST00000565038 TFB1MQ8WVM0 346 aaKnown RBP2.95□□□□□ -1.94
PALB2-203ENST00000565038 TMEM45BQ96B21 275 aa2.95□□□□□ -1.94
PALB2-203ENST00000565038 DNAJA3Q96EY1 480 aa2.95□□□□□ -1.94
PALB2-203ENST00000565038 CYYR1Q96J86 154 aa2.95□□□□□ -1.94
PALB2-203ENST00000565038 COMMD8Q9NX08 183 aa2.95□□□□□ -1.94
PALB2-203ENST00000565038 MIOXQ9UGB7 285 aa2.95□□□□□ -1.94
PALB2-203ENST00000565038 FAM220BPB1ANY3 271 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 CDX4O14627 284 aaPredicted RBP2.94□□□□□ -1.94
PALB2-203ENST00000565038 ARPC1BO15143 372 aaKnown RBP2.94□□□□□ -1.94
PALB2-203ENST00000565038 LYPD3O95274 346 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 IGSF6O95976 241 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 ALDH3B2P48448 385 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 SGSHP51688 502 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 HNRNPFP52597 415 aaKnown RBP2.94□□□□□ -1.94
PALB2-203ENST00000565038 BNIP1Q12981 228 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 LIPKQ5VXJ0 399 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 PRR5LQ6MZQ0 368 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 DPY19L2P2Q6ZN68 376 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 ERICH1Q86X53 443 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 APOBEC3FQ8IUX4 373 aaKnown RBP2.94□□□□□ -1.94
PALB2-203ENST00000565038 CNTN4Q8IWV2 1026 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 UNC45BQ8IWX7 931 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 GPR65Q8IYL9 337 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 CHCHD4Q8N4Q1 142 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 FNDC8Q8TC99 324 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 DLX4Q92988 240 aaPredicted RBP2.94□□□□□ -1.94
PALB2-203ENST00000565038 CABS1Q96KC9 395 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 HCAR1Q9BXC0 346 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 CARD9Q9H257 536 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 STARD5Q9NSY2 213 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 LHX3Q9UBR4 397 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 KLHL21Q9UJP4 597 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 NOL7Q9UMY1 257 aaKnown RBP2.94□□□□□ -1.94
PALB2-203ENST00000565038 RPH3AQ9Y2J0 694 aaPredicted RBP2.94□□□□□ -1.94
PALB2-203ENST00000565038 TEX264Q9Y6I9 313 aa2.94□□□□□ -1.94
PALB2-203ENST00000565038 PRRC2AP48634 2157 aaKnown RBP2.93□□□□□ -1.94
PALB2-203ENST00000565038 EPOPA6NHQ4 379 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 ZFP92A6NM28 416 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 H0Y9J4 135 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 PDLIM1O00151 329 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 SLC17A2O00624 439 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 NUDT21O43809 227 aaKnown RBP2.93□□□□□ -1.94
PALB2-203ENST00000565038 VEGFDO43915 354 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 HSF2BPO75031 334 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 CYP11B1P15538 503 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 GNSP15586 552 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 IGFBP5P24593 272 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 TMOD1P28289 359 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 METAP1P53582 386 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 CASP9P55211 416 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 STX17P56962 302 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 SRP54P61011 504 aaKnown RBP2.93□□□□□ -1.94
PALB2-203ENST00000565038 RPA4Q13156 261 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 TSTA3Q13630 321 aaPredicted RBP2.93□□□□□ -1.94
PALB2-203ENST00000565038 LASP1Q14847 261 aaKnown RBP2.93□□□□□ -1.94
PALB2-203ENST00000565038 ZNF528Q3MIS6 628 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 ZNF658Q5TYW1 1059 aaPredicted RBP2.93□□□□□ -1.94
PALB2-203ENST00000565038 DLEU7Q6UYE1 221 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 YRDCQ86U90 279 aaKnown RBP2.93□□□□□ -1.94
PALB2-203ENST00000565038 RANBP3LQ86VV4 465 aaPredicted RBP2.93□□□□□ -1.94
PALB2-203ENST00000565038 CEND1Q8N111 149 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 U2AF1L4Q8WU68 220 aaKnown RBP2.93□□□□□ -1.94
PALB2-203ENST00000565038 C11orf24Q96F05 449 aaPredicted RBP2.93□□□□□ -1.94
PALB2-203ENST00000565038 MAGEB18Q96M61 343 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 ELOVL4Q9GZR5 314 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 ALDH8A1Q9H2A2 487 aaPredicted RBP2.93□□□□□ -1.94
PALB2-203ENST00000565038 MID1IP1Q9NPA3 183 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 DPM3Q9P2X0 92 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 CLIP2Q9UDT6 1046 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 PURGQ9UJV8 347 aaKnown RBP2.93□□□□□ -1.94
PALB2-203ENST00000565038 PLEKHA6Q9Y2H5 1048 aa2.93□□□□□ -1.94
PALB2-203ENST00000565038 DHX29Q7Z478 1369 aaKnown RBP2.92□□□□□ -1.94
PALB2-203ENST00000565038 A0A0U1RRA0 63 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 TMEM89A2RUT3 159 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 LRIT2A6NDA9 550 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 H3BMH7 237 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 NOL4O94818 638 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 ABHD2P08910 425 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 RFC2P35250 354 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 ACVR1BP36896 505 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 P2RY4P51582 365 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 NOP14P78316 857 aaKnown RBP2.92□□□□□ -1.94
PALB2-203ENST00000565038 ACTN3Q08043 901 aaPredicted RBP2.92□□□□□ -1.94
PALB2-203ENST00000565038 IL18R1Q13478 541 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 EIF2B1Q14232 305 aaKnown RBP2.92□□□□□ -1.94
PALB2-203ENST00000565038 CARTPTQ16568 116 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms