RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 NSG1A0A0A6YYJ2 146 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 HMGN4O00479 90 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 CXCR6O00574 342 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 PEX12O00623 359 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 SLC28A2O43868 658 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 SEC24DO94855 1032 aaPredicted RBP11.92□□□□□ -0.5
CLK3-214ENST00000564096 IFNA14P01570 189 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 BCHEP06276 602 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 OR12D1P0DN82 309 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 NR2F1P10589 423 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 S1PR1P21453 382 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 GZMMP51124 257 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 CLCN2P51788 898 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 CASP9P55211 416 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 SLC37A1P57057 533 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 CORO7P57737 925 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 FOXL2P58012 376 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 SLC26A5P58743 744 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 FOXK2Q01167 660 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 CAMK2BQ13554 666 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 TBC1D25Q3MII6 688 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 PRAMEF8Q5VWM4 474 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 PRAMEF7Q5VXH5 474 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 LCN8Q6JVE9 175 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 HSDL2Q6YN16 418 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 DTX1Q86Y01 620 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 PTOV1Q86YD1 416 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 C16orf52Q8NHV5 167 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 BBS10Q8TAM1 723 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 GPR151Q8TDV0 419 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 DOK4Q8TEW6 326 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 ZNF721Q8TF20 911 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 XAGE5Q8WWM1 108 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 STMN2Q93045 179 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 NKD1Q969G9 470 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 C8orf44Q96CB5 159 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 C16orf58Q96GQ5 468 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 RSRC1Q96IZ7 334 aaKnown RBP11.92□□□□□ -0.5
CLK3-214ENST00000564096 VSTM2LQ96N03 204 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 BTBD9Q96Q07 612 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 GAL3ST4Q96RP7 486 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 YIPF4Q9BSR8 244 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 ITPAQ9BY32 194 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 ZNF700Q9H0M5 742 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 PIGUQ9H490 435 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 SERHL2Q9H4I8 314 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 ANKRA2Q9H9E1 313 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 EGFL7Q9UHF1 273 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 MRTO4Q9UKD2 239 aaKnown RBP11.92□□□□□ -0.5
CLK3-214ENST00000564096 KLK13Q9UKR3 277 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 PPIEQ9UNP9 301 aaKnown RBP11.92□□□□□ -0.5
CLK3-214ENST00000564096 OR10H1Q9Y4A9 318 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 HS3ST3B1Q9Y662 390 aa11.92□□□□□ -0.5
CLK3-214ENST00000564096 FER1L5A0AVI2 2057 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 IGHV1-45A0A0A0MS14 117 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 IGHV3-20A0A0C4DH32 117 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 LOC101059948A0A1B0GTJ6 334 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 C2orf92A0A1B0GVN3 265 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 FRG2CA6NGY1 282 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 HRKO00198 91 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 TERTO14746 1132 aaKnown RBP11.91□□□□□ -0.5
CLK3-214ENST00000564096 NUDT7P0C024 238 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 ACP2P11117 423 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 COX6A1P12074 109 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 TRHRP34981 398 aaPredicted RBP11.91□□□□□ -0.5
CLK3-214ENST00000564096 EMDP50402 254 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 PSMD4P55036 377 aaKnown RBP11.91□□□□□ -0.5
CLK3-214ENST00000564096 ACTR3P61158 418 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 RPS18P62269 152 aaKnown RBP11.91□□□□□ -0.5
CLK3-214ENST00000564096 POU6F2P78424 691 aaPredicted RBP11.91□□□□□ -0.5
CLK3-214ENST00000564096 DUSP8Q13202 625 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 MYBPC3Q14896 1274 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 PCOLCEQ15113 449 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 EBPQ15125 230 aaKnown RBP11.91□□□□□ -0.5
CLK3-214ENST00000564096 GPAT3Q53EU6 434 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 LRRC23Q53EV4 343 aaPredicted RBP11.91□□□□□ -0.5
CLK3-214ENST00000564096 GLYATQ6IB77 296 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 REEP3Q6NUK4 255 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 NDUFAF7Q7L592 441 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 MRGPREQ86SM8 312 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 PATL1Q86TB9 770 aaKnown RBP11.91□□□□□ -0.5
CLK3-214ENST00000564096 KRT73Q86Y46 540 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 SLC44A2Q8IWA5 706 aaPredicted RBP11.91□□□□□ -0.5
CLK3-214ENST00000564096 EID3Q8N140 333 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 C10orf111Q8N326 155 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 ZNF615Q8N8J6 731 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 SLC16A11Q8NCK7 471 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 C17orf47Q8NEP4 570 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 BHLHE22Q8NFJ8 381 aaPredicted RBP11.91□□□□□ -0.5
CLK3-214ENST00000564096 OR5L2Q8NGL0 311 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 OR8K3Q8NH51 312 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 NFKBIDQ8NI38 313 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 HOXB13Q92826 284 aaPredicted RBP11.91□□□□□ -0.5
CLK3-214ENST00000564096 CDS1Q92903 461 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 RAB8BQ92930 207 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 MAL2Q969L2 176 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 TMEM19Q96HH6 336 aa11.91□□□□□ -0.5
CLK3-214ENST00000564096 TRNT1Q96Q11 434 aaKnown RBP11.91□□□□□ -0.5
CLK3-214ENST00000564096 WDR77Q9BQA1 342 aaPredicted RBP11.91□□□□□ -0.5
CLK3-214ENST00000564096 BTBD2Q9BX70 525 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms