RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 STK11Q15831 433 aa9.22□□□□□ -0.93
HDGFL3-204ENST00000563790 ASTE1Q2TB18 679 aaPredicted RBP9.22□□□□□ -0.93
HDGFL3-204ENST00000563790 TIMM23BQ5SRD1 257 aa9.22□□□□□ -0.93
HDGFL3-204ENST00000563790 PGBD2Q6P3X8 592 aa9.22□□□□□ -0.93
HDGFL3-204ENST00000563790 MAP7D3Q8IWC1 876 aa9.22□□□□□ -0.93
HDGFL3-204ENST00000563790 TMEM52Q8NDY8 209 aa9.22□□□□□ -0.93
HDGFL3-204ENST00000563790 TOR1AIP2Q8NFQ8 470 aa9.22□□□□□ -0.93
HDGFL3-204ENST00000563790 PYCR2Q96C36 320 aa9.22□□□□□ -0.93
HDGFL3-204ENST00000563790 BPIFA3Q9BQP9 254 aa9.22□□□□□ -0.93
HDGFL3-204ENST00000563790 STMN4Q9H169 189 aaPredicted RBP9.22□□□□□ -0.93
HDGFL3-204ENST00000563790 AMFRQ9UKV5 643 aa9.22□□□□□ -0.93
HDGFL3-204ENST00000563790 MRPS18CQ9Y3D5 142 aaKnown RBP9.22□□□□□ -0.93
HDGFL3-204ENST00000563790 ATP23Q9Y6H3 246 aa9.22□□□□□ -0.93
HDGFL3-204ENST00000563790 F8W8V4 182 aa9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 H7C0S8 307 aa9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 TRAF3IP2O43734 574 aaPredicted RBP9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 ETHE1O95571 254 aa9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 IGKV3-11P04433 115 aa9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 SERPING1P05155 500 aa9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 NTF4P34130 210 aa9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 ADRA1AP35348 466 aa9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 MTNR1AP48039 350 aa9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 B3GALT5-AS1P59052 145 aa9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 RPL15P61313 204 aaKnown RBP9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 RPP38P78345 283 aaKnown RBP9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 MLC1Q15049 377 aa9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 ARMCX4Q5H9R4 360 aa9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 KLHL17Q6TDP4 642 aa9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 TFAP2EQ6VUC0 442 aa9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 P2RY8Q86VZ1 359 aa9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 POP5Q969H6 163 aaKnown RBP9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 ZNF830Q96NB3 372 aaPredicted RBP9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 FCRL5Q96RD9 977 aa9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 GLRX2Q9NS18 164 aa9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 UVRAGQ9P2Y5 699 aa9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 BZW2Q9Y6E2 419 aaKnown RBP9.21□□□□□ -0.94
HDGFL3-204ENST00000563790 APOL1O14791 398 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 NDUFS4O43181 175 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 HOXA3O43365 443 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 CRTAMO95727 393 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 ADAP00813 363 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 PROCP04070 461 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 MED14OSP0DP75 135 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 AOAHP28039 575 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 CDKN2BP42772 138 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 SLC6A8P48029 635 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 KRTAP10-11P60412 298 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 GPS1Q13098 491 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 PWP1Q13610 501 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 IQCB1Q15051 598 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 RPS6KA1Q15418 735 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 KLF17Q5JT82 389 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 CCDC181Q5TID7 509 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 TMEM81Q6P7N7 255 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 MFSD7Q6UXD7 560 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 RANBP10Q6VN20 620 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 CLNKQ7Z7G1 428 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 CARM1Q86X55 608 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 ZNF595Q8IYB9 648 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 ZNF567Q8N184 647 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 WDSUB1Q8N9V3 476 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 MFSD9Q8NBP5 474 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 LKAAEAR1Q8TD35 194 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 UTP15Q8TED0 518 aaKnown RBP9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 GFM2Q969S9 779 aaKnown RBP9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 FKRPQ9H9S5 495 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 GPRC5BQ9NZH0 403 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 CTTNBP2NLQ9P2B4 639 aa9.2□□□□□ -0.94
HDGFL3-204ENST00000563790 ZNF839A8K0R7 811 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 LYNX1G3V0Z9 82 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 H0YL77 283 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 MYO1CO00159 1063 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 GPANK1O95872 356 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 AGTP01019 485 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 GYPCP04921 128 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 TUBBP07437 444 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 ERCC1P07992 297 aaPredicted RBP9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 LYNX1P0DP58 116 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 AGTR1P30556 359 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 GPC1P35052 558 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 HSD17B2P37059 387 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 GPR6P46095 362 aaPredicted RBP9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 ZBED6P86452 979 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 ACAP2Q15057 778 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 ANKRD20A4Q4UJ75 823 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 ANKRD20A2Q5SQ80 823 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 ANKRD20A1Q5TYW2 823 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 LRRC38Q5VT99 294 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 ANKRD20A3Q5VUR7 823 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 SLC30A6Q6NXT4 461 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 SASS6Q6UVJ0 657 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 TMEM64Q6YI46 380 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 RNF111Q6ZNA4 994 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 CNTN4Q8IWV2 1026 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 KLHDC8BQ8IXV7 354 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 TAGAPQ8N103 731 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 METTL25Q8N6Q8 603 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 PPFIBP2Q8ND30 876 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 IPMKQ8NFU5 416 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms