RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 WISP2O76076 250 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 IGKV1D-16P01601 117 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 TRHRP34981 398 aaPredicted RBP9.03□□□□□ -0.96
CLK3-208ENST00000562626 PRKAG1P54619 331 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 PMP22Q01453 160 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 ZNF155Q12901 538 aaPredicted RBP9.03□□□□□ -0.96
CLK3-208ENST00000562626 RCAN2Q14206 197 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 PIGGQ5H8A4 983 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 C6orf163Q5TEZ5 329 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 IL20RBQ6UXL0 311 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 Q6ZS92 163 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 SLC29A4Q7RTT9 530 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 OLIG3Q7RTU3 272 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 SZRD1Q7Z422 152 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 SPATA21Q7Z572 469 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 ZAR1Q86SH2 424 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 GALNT10Q86SR1 603 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 RETREG3Q86VR2 466 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 TREML1Q86YW5 311 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 MSRB3Q8IXL7 192 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 LGI4Q8N135 537 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 CPSF7Q8N684 471 aaKnown RBP9.03□□□□□ -0.96
CLK3-208ENST00000562626 SLC16A11Q8NCK7 471 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 NUP43Q8NFH3 380 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 OR4A15Q8NGL6 344 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 GOT1L1Q8NHS2 421 aaPredicted RBP9.03□□□□□ -0.96
CLK3-208ENST00000562626 ZFP28Q8NHY6 868 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 PIK3R3Q92569 461 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 HAS2Q92819 552 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 BTBD9Q96Q07 612 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 LMF2Q9BU23 707 aaKnown RBP9.03□□□□□ -0.96
CLK3-208ENST00000562626 RNF32Q9H0A6 362 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 ZCCHC3Q9NUD5 404 aaKnown RBP9.03□□□□□ -0.96
CLK3-208ENST00000562626 DDX18Q9NVP1 670 aaKnown RBP9.03□□□□□ -0.96
CLK3-208ENST00000562626 GPATCH2Q9NW75 528 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 FBXO34Q9NWN3 711 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 FAM120CQ9NX05 1096 aaKnown RBP9.03□□□□□ -0.96
CLK3-208ENST00000562626 TAS2R9Q9NYW1 312 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 FLRT3Q9NZU0 649 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 ARMCX1Q9P291 453 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 BTNL2Q9UIR0 455 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 ADAM21Q9UKJ8 722 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 NTNG1Q9Y2I2 539 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 ZNF451Q9Y4E5 1061 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 HRH3Q9Y5N1 445 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 SNX8Q9Y5X2 465 aa9.03□□□□□ -0.96
CLK3-208ENST00000562626 RNF103-CHMP3A0A140T963 221 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 PINLYPA6NC86 204 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 C17orf51A8MQB3 221 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 G3V3Y1 287 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 FBP2O00757 339 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 FCHO1O14526 889 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 ADAM10O14672 748 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 DYRK3O43781 588 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 ERN1O75460 977 aaKnown RBP9.02□□□□□ -0.97
CLK3-208ENST00000562626 SORBS2O94875 1100 aaKnown RBP9.02□□□□□ -0.97
CLK3-208ENST00000562626 HMGN2P05204 90 aaKnown RBP9.02□□□□□ -0.97
CLK3-208ENST00000562626 IFI6P09912 130 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 FBXO45P0C2W1 286 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 CCL3P10147 92 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 SOAT1P35610 550 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 PPICP45877 212 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 CCT3P49368 545 aaKnown RBP9.02□□□□□ -0.97
CLK3-208ENST00000562626 MAN2A2P49641 1150 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 HLCSP50747 726 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 SSR4P51571 173 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 FBXW4P57775 412 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 STX1BP61266 288 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 AP2B1P63010 937 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 ARG2P78540 354 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 NFATC3Q12968 1075 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 KLF10Q13118 480 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 TP53BP2Q13625 1128 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 LASP1Q14847 261 aaKnown RBP9.02□□□□□ -0.97
CLK3-208ENST00000562626 OR1C1Q15619 314 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 DUSP5Q16690 384 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 DPY19L1Q2PZI1 675 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 ZNF791Q3KP31 576 aaPredicted RBP9.02□□□□□ -0.97
CLK3-208ENST00000562626 VPS26BQ4G0F5 336 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 BICRALQ6AI39 1079 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 MFSD12Q6NUT3 480 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 PIGWQ7Z7B1 504 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 C10orf111Q8N326 155 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 GLB1L3Q8NCI6 653 aaPredicted RBP9.02□□□□□ -0.97
CLK3-208ENST00000562626 C7orf57Q8NEG2 295 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 OR10G3Q8NGC4 313 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 OR5D16Q8NGK9 328 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 OR5L2Q8NGL0 311 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 OR5M3Q8NGP4 307 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 ASB15Q8WXK1 588 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 GTF2H4Q92759 462 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 ERP27Q96DN0 273 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 SPDL1Q96EA4 605 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 AURKBQ96GD4 344 aaPredicted RBP9.02□□□□□ -0.97
CLK3-208ENST00000562626 LCORQ96JN0 433 aaPredicted RBP9.02□□□□□ -0.97
CLK3-208ENST00000562626 ZBTB18Q99592 522 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 PRPF18Q99633 342 aaKnown RBP9.02□□□□□ -0.97
CLK3-208ENST00000562626 TRIM8Q9BZR9 551 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 PAIP1Q9H074 479 aaKnown RBP9.02□□□□□ -0.97
CLK3-208ENST00000562626 TRIM45Q9H8W5 580 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms