RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 LMF2Q9BU23 707 aaKnown RBP13.32□□□□□ -0.28
COMMD4-205ENST00000562310 VN1R1Q9GZP7 353 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 ANKRA2Q9H9E1 313 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 IL1RAPQ9NPH3 570 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 POLE3Q9NRF9 147 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 SLC22A11Q9NSA0 550 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 IFT80Q9P2H3 777 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-205ENST00000562310 CTSFQ9UBX1 484 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 PRODH2Q9UF12 536 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 CNOT11Q9UKZ1 510 aaKnown RBP13.32□□□□□ -0.28
COMMD4-205ENST00000562310 DTNAQ9Y4J8 743 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 LOXL2Q9Y4K0 774 aa13.32□□□□□ -0.28
COMMD4-205ENST00000562310 HEMK1Q9Y5R4 338 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-205ENST00000562310 GPC6Q9Y625 555 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-205ENST00000562310 C17orf105B2RV13 164 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 MEN1O00255 615 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 PRSS23O95084 383 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 NKX2-2O95096 273 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 KLK3P07288 261 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-205ENST00000562310 GUSBP08236 651 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 ZGLP1P0C6A0 271 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 ITGA2P17301 1181 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 S1PR1P21453 382 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 TGM1P22735 817 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 MAP3K8P41279 467 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 ZNF267Q14586 743 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-205ENST00000562310 EXOSC7Q15024 291 aaKnown RBP13.31□□□□□ -0.28
COMMD4-205ENST00000562310 DUSP5Q16690 384 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 ISXQ2M1V0 245 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 ARHGAP11BQ3KRB8 267 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 CCDC157Q569K6 752 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 VWA2Q5GFL6 755 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 RPS26P11Q5JNZ5 115 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-205ENST00000562310 DCAF12Q5T6F0 453 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 LPCAT4Q643R3 524 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 DGAT2L6Q6ZPD8 337 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 TMEM151BQ8IW70 566 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 PACRGLQ8N7B6 248 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 SLC38A9Q8NBW4 561 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 SLC16A11Q8NCK7 471 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 FAM110BQ8TC76 370 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 CDS1Q92903 461 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 DAZLQ92904 295 aaKnown RBP13.31□□□□□ -0.28
COMMD4-205ENST00000562310 SLC35A4Q96G79 324 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 CTRCQ99895 268 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 TACO1Q9BSH4 297 aaKnown RBP13.31□□□□□ -0.28
COMMD4-205ENST00000562310 C9orf16Q9BUW7 83 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 CNPPD1Q9BV87 410 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 DDA1Q9BW61 102 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 WDR54Q9H977 334 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 FOLH1BQ9HBA9 442 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 SEC14L3Q9UDX4 400 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 MKL2Q9ULH7 1088 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 ERVK-19Q9WJR5 959 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 CFL2Q9Y281 166 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 PADI2Q9Y2J8 665 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 DSPPQ9NZW4 1301 aa13.31□□□□□ -0.28
COMMD4-205ENST00000562310 SEC16AO15027 2179 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 CCDC187A0A096LP49 1063 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 PRAMEF27A3QJZ7 478 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 VSTM2BA6NLU5 285 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 A8MVJ9 347 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 C9J4A7 227 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 DPM1O60762 260 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 CSO75390 466 aaKnown RBP13.3□□□□□ -0.28
COMMD4-205ENST00000562310 MFN2O95140 757 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 H6PDO95479 791 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 RECKO95980 971 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 CST1P01037 141 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 OPN1SWP03999 348 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 CHRM4P08173 479 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 CCL4P13236 92 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 CD247P20963 164 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 HSPA13P48723 471 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 PGDP52209 483 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 LIMK1P53667 647 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 KCNJ10P78508 379 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 KCNC4Q03721 635 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 TRIP6Q15654 476 aaKnown RBP13.3□□□□□ -0.28
COMMD4-205ENST00000562310 NSDHLQ15738 373 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 IZUMO2Q6UXV1 221 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 VTCN1Q7Z7D3 282 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 AMIGO2Q86SJ2 522 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 ICA1LQ8NDH6 482 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 PROX1Q92786 737 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 TSLPQ969D9 159 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 OTUB1Q96FW1 271 aaPredicted RBP13.3□□□□□ -0.28
COMMD4-205ENST00000562310 VSTM2LQ96N03 204 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 COL21A1Q96P44 957 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 ZNF184Q99676 751 aaPredicted RBP13.3□□□□□ -0.28
COMMD4-205ENST00000562310 ULBP3Q9BZM4 244 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 SEMA6AQ9H2E6 1030 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 PNO1Q9NRX1 252 aaKnown RBP13.3□□□□□ -0.28
COMMD4-205ENST00000562310 THSD1Q9NS62 852 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 FAM86C1Q9NVL1 165 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 GPN3Q9UHW5 284 aaPredicted RBP13.3□□□□□ -0.28
COMMD4-205ENST00000562310 CLCA3PQ9Y6N3 262 aa13.3□□□□□ -0.28
COMMD4-205ENST00000562310 H0YJX3 145 aa13.29□□□□□ -0.28
COMMD4-205ENST00000562310 AGRPO00253 132 aa13.29□□□□□ -0.28
COMMD4-205ENST00000562310 GNGT2O14610 69 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms