RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 OR5D16Q8NGK9 328 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 BBS10Q8TAM1 723 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 PMM1Q92871 262 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 GIMAP5Q96F15 307 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 SLC47A1Q96FL8 570 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 SLC35A4Q96G79 324 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 TMEM19Q96HH6 336 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 SENP5Q96HI0 755 aaPredicted RBP9.61□□□□□ -0.87
USP3-219ENST00000561326 FBXL20Q96IG2 436 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 TRNT1Q96Q11 434 aaKnown RBP9.61□□□□□ -0.87
USP3-219ENST00000561326 B3GNT4Q9C0J1 378 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 OR10A5Q9H207 317 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 PIGUQ9H490 435 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 MTHFD2LQ9H903 347 aaPredicted RBP9.61□□□□□ -0.87
USP3-219ENST00000561326 ANKRA2Q9H9E1 313 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 DUSP22Q9NRW4 184 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 SLC22A11Q9NSA0 550 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 TOR4AQ9NXH8 423 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 COPS7AQ9UBW8 275 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 CTSFQ9UBX1 484 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 NKX1-2Q9UD57 310 aaPredicted RBP9.61□□□□□ -0.87
USP3-219ENST00000561326 C19orf25Q9UFG5 118 aaPredicted RBP9.61□□□□□ -0.87
USP3-219ENST00000561326 ZNF232Q9UNY5 417 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 PCDHGA3Q9Y5H0 932 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 B3GALT1Q9Y5Z6 326 aa9.61□□□□□ -0.87
USP3-219ENST00000561326 A8MUA0 341 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 H3BNX3 289 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 DLL1O00548 723 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 BRINP1O60477 761 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 ALOX12BO75342 701 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 STK17BO94768 372 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 CBX7O95931 251 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 RECKO95980 971 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 FTH1P19P0C7X4 201 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 ZNF28P17035 718 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 AQP1P29972 269 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 SLC5A2P31639 672 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 GABRA3P34903 492 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 GCKP35557 465 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 PCBP3P57721 371 aaKnown RBP9.6□□□□□ -0.87
USP3-219ENST00000561326 ZNF155Q12901 538 aaPredicted RBP9.6□□□□□ -0.87
USP3-219ENST00000561326 SYPL1Q16563 259 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 ARHGAP11BQ3KRB8 267 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 RNF111Q6ZNA4 994 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 DGAT2L6Q6ZPD8 337 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 TMPRSS12Q86WS5 348 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 SLC16A11Q8NCK7 471 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 GALNT6Q8NCL4 622 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 CATSPER1Q8NEC5 780 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 GPR151Q8TDV0 419 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 PTPMT1Q8WUK0 201 aaPredicted RBP9.6□□□□□ -0.87
USP3-219ENST00000561326 TSLPQ969D9 159 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 TPD52L3Q96J77 140 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 SLC46A1Q96NT5 459 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 TREX2Q9BQ50 279 aaPredicted RBP9.6□□□□□ -0.87
USP3-219ENST00000561326 DOHHQ9BU89 302 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 CRB3Q9BUF7 120 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 CHID1Q9BWS9 393 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 BTBD2Q9BX70 525 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 SERHL2Q9H4I8 314 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 BCL2L10Q9HD36 194 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 C3orf18Q9UK00 162 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 ERVK-19Q9WJR5 959 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 PADI2Q9Y2J8 665 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 CLDN16Q9Y5I7 305 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 HEMK1Q9Y5R4 338 aaPredicted RBP9.6□□□□□ -0.87
USP3-219ENST00000561326 V9GYQ6 96 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 SDK2Q58EX2 2172 aa9.6□□□□□ -0.87
USP3-219ENST00000561326 SPAARA0A1B0GVQ0 90 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 DEAF1O75398 565 aaPredicted RBP9.59□□□□□ -0.87
USP3-219ENST00000561326 STX11O75558 287 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 DKK1O94907 266 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 LDLRP01130 860 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 IGHEP01854 428 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 SSTR4P31391 388 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 ETV5P41161 510 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 EMDP50402 254 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 DCAF7P61962 342 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 POU6F2P78424 691 aaPredicted RBP9.59□□□□□ -0.87
USP3-219ENST00000561326 DUSP5Q16690 384 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 C3orf38Q5JPI3 329 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 HLA-DQA1Q5Y7H0 255 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 FAAH2Q6GMR7 532 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 HEPHL1Q6MZM0 1159 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 MRPL14Q6P1L8 145 aaKnown RBP9.59□□□□□ -0.87
USP3-219ENST00000561326 ENPP6Q6UWR7 440 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 ZNF517Q6ZMY9 492 aaPredicted RBP9.59□□□□□ -0.87
USP3-219ENST00000561326 LRRC74BQ6ZQY2 392 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 SLC29A4Q7RTT9 530 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 ARMC8Q8IUR7 673 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 GALNT15Q8N3T1 639 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 COX18Q8N8Q8 333 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 ANKFN1Q8N957 763 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 SPPL2AQ8TCT8 520 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 DOK4Q8TEW6 326 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 PROX1Q92786 737 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 HOXB13Q92826 284 aaPredicted RBP9.59□□□□□ -0.87
USP3-219ENST00000561326 CDS1Q92903 461 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 SLCO4A1Q96BD0 722 aa9.59□□□□□ -0.87
USP3-219ENST00000561326 CENPNQ96H22 339 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms