RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, human

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP8-209	ENST00000560297	NAGA	P17050	411 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	PPIB	P23284	216 aa	Known RBP	11.35	□□□□□ -0.59
USP8-209	ENST00000560297	PTPN6	P29350	595 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	CDKN2C	P42773	168 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	ANXA11	P50995	505 aa	Known RBP	11.35	□□□□□ -0.59
USP8-209	ENST00000560297	SSR4	P51571	173 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	NR0B1	P51843	470 aa	Known RBP	11.35	□□□□□ -0.59
USP8-209	ENST00000560297	ZNF155	Q12901	538 aa	Predicted RBP	11.35	□□□□□ -0.59
USP8-209	ENST00000560297	MFAP5	Q13361	173 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	RAPSN	Q13702	412 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	LINC00303	Q3SY05	128 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	CYP27C1	Q4G0S4	372 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	B3GNTL1	Q67FW5	361 aa	Predicted RBP	11.35	□□□□□ -0.59
USP8-209	ENST00000560297	FCRLB	Q6BAA4	426 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	OPN5	Q6U736	354 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	IGFL2	Q6UWQ7	119 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	DND1	Q8IYX4	353 aa	Known RBP	11.35	□□□□□ -0.59
USP8-209	ENST00000560297	OR5AK3P	Q8NH89	298 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	MIPOL1	Q8TD10	442 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	ADAMTS15	Q8TE58	950 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	TTC9	Q92623	222 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	HAS2	Q92819	552 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	HOXB13	Q92826	284 aa	Predicted RBP	11.35	□□□□□ -0.59
USP8-209	ENST00000560297	GIMAP5	Q96F15	307 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	WBP1	Q96G27	269 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	CRELD1	Q96HD1	420 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	STAC	Q99469	402 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	ITPA	Q9BY32	194 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	RNF32	Q9H0A6	362 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	LIN28A	Q9H9Z2	209 aa	Known RBP	11.35	□□□□□ -0.59
USP8-209	ENST00000560297	EFCAB1	Q9HAE3	211 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297		Q9N2J8	555 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	EQTN	Q9NQ60	294 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	GPATCH2	Q9NW75	528 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	GID8	Q9NWU2	228 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	MAP10	Q9P2G4	905 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	MRTO4	Q9UKD2	239 aa	Known RBP	11.35	□□□□□ -0.59
USP8-209	ENST00000560297	GMEB1	Q9Y692	573 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	PCSK5	Q92824	1860 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	ERVH48-1	M5A8F1	160 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	CLIC1	O00299	241 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	FBP2	O00757	339 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	AGR2	O95994	175 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	ALOX5	P09917	674 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	CT45A8	P0DMV1	189 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	CT45A9	P0DMV2	189 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	MATN1	P21941	496 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	GABRA3	P34903	492 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	TRHR	P34981	398 aa	Predicted RBP	11.34	□□□□□ -0.59
USP8-209	ENST00000560297	CASR	P41180	1078 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	MAP3K8	P41279	467 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	MNAT1	P51948	309 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	PSG6	Q00889	435 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	KCNAB2	Q13303	367 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	NFYC	Q13952	458 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	LASP1	Q14847	261 aa	Known RBP	11.34	□□□□□ -0.59
USP8-209	ENST00000560297	KRT72	Q14CN4	511 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	CT45A2	Q5DJT8	189 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	EXOSC6	Q5RKV6	272 aa	Known RBP	11.34	□□□□□ -0.59
USP8-209	ENST00000560297	CDC73	Q6P1J9	531 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	IGFL3	Q6UXB1	125 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	DLEU7	Q6UYE1	221 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	LINC00696	Q6ZRV3	163 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	RETREG3	Q86VR2	466 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	TREML1	Q86YW5	311 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	SLC44A2	Q8IWA5	706 aa	Predicted RBP	11.34	□□□□□ -0.59
USP8-209	ENST00000560297	GPALPP1	Q8IXQ4	340 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	TMEM156	Q8N614	296 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	FITM2	Q8N6M3	262 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	ZFP90	Q8TF47	636 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	SLC9A6	Q92581	669 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	C16orf58	Q96GQ5	468 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	ABHD17A	Q96GS6	310 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	RASL10B	Q96S79	203 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	NPAS2	Q99743	824 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	SH3GL1	Q99961	368 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	NXF5	Q9H1B4	397 aa	Known RBP	11.34	□□□□□ -0.59
USP8-209	ENST00000560297	PIGU	Q9H490	435 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	RAD21L1	Q9H4I0	556 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	TRIM45	Q9H8W5	580 aa	Predicted RBP	11.34	□□□□□ -0.59
USP8-209	ENST00000560297	TPT1P8	Q9HAU6	139 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	DUSP22	Q9NRW4	184 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	SLC6A13	Q9NSD5	602 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	SLAMF8	Q9P0V8	285 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	CORO2B	Q9UQ03	480 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	DTX4	Q9Y2E6	619 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	OR10H1	Q9Y4A9	318 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	NPFFR2	Q9Y5X5	522 aa		11.34	□□□□□ -0.59
USP8-209	ENST00000560297	EVPLL	A8MZ36	301 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	MRAS	O14807	208 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	ASNA1	O43681	348 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	NKX2-2	O95096	273 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	KRT20	P35900	424 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	CYB561	P49447	251 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	MAN2A2	P49641	1150 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	TMED10	P49755	219 aa	Known RBP	11.33	□□□□□ -0.6
USP8-209	ENST00000560297	HLCS	P50747	726 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	PSMD4	P55036	377 aa	Known RBP	11.33	□□□□□ -0.6
USP8-209	ENST00000560297	CORO7	P57737	925 aa		11.33	□□□□□ -0.6
USP8-209	ENST00000560297	CBX1	P83916	185 aa		11.33	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms