RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 BIRC7Q96CA5 298 aa3.62□□□□□ -1.83
CASC4-206ENST00000558847 VSTM2LQ96N03 204 aa3.62□□□□□ -1.83
CASC4-206ENST00000558847 FAM173AQ9BQD7 235 aa3.62□□□□□ -1.83
CASC4-206ENST00000558847 APOOQ9BUR5 198 aa3.62□□□□□ -1.83
CASC4-206ENST00000558847 LRRCC1Q9C099 1032 aa3.62□□□□□ -1.83
CASC4-206ENST00000558847 EGLN1Q9GZT9 426 aa3.62□□□□□ -1.83
CASC4-206ENST00000558847 ALG9Q9H6U8 611 aa3.62□□□□□ -1.83
CASC4-206ENST00000558847 KAT8Q9H7Z6 458 aaKnown RBP3.62□□□□□ -1.83
CASC4-206ENST00000558847 CENPMQ9NSP4 180 aa3.62□□□□□ -1.83
CASC4-206ENST00000558847 GPR83Q9NYM4 423 aa3.62□□□□□ -1.83
CASC4-206ENST00000558847 GALPQ9UBC7 116 aa3.62□□□□□ -1.83
CASC4-206ENST00000558847 CTSZQ9UBR2 303 aa3.62□□□□□ -1.83
CASC4-206ENST00000558847 GHRLQ9UBU3 117 aa3.62□□□□□ -1.83
CASC4-206ENST00000558847 ASIC3Q9UHC3 531 aa3.62□□□□□ -1.83
CASC4-206ENST00000558847 RNF6Q9Y252 685 aa3.62□□□□□ -1.83
CASC4-206ENST00000558847 EIF3LQ9Y262 564 aaKnown RBP3.62□□□□□ -1.83
CASC4-206ENST00000558847 KLHDC2Q9Y2U9 406 aa3.62□□□□□ -1.83
CASC4-206ENST00000558847 MOB4Q9Y3A3 225 aa3.62□□□□□ -1.83
CASC4-206ENST00000558847 FBXO7Q9Y3I1 522 aa3.62□□□□□ -1.83
CASC4-206ENST00000558847 MFHAS1Q9Y4C4 1052 aa3.62□□□□□ -1.83
CASC4-206ENST00000558847 IGHV3OR16-10A0A075B7F0 116 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 A0A0J9YWU9 116 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 A0A1B0GUL7 405 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 RNF222A6NCQ9 220 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 WASHC1A8K0Z3 465 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 CA3P07451 260 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 TSPY4P0CV99 314 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 TSPY10P0CW01 314 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 H2AFXP16104 143 aaPredicted RBP3.61□□□□□ -1.83
CASC4-206ENST00000558847 ZNF10P21506 573 aaPredicted RBP3.61□□□□□ -1.83
CASC4-206ENST00000558847 PAICSP22234 425 aaKnown RBP3.61□□□□□ -1.83
CASC4-206ENST00000558847 UCP1P25874 307 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 SAA4P35542 130 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 VCPP55072 806 aaKnown RBP3.61□□□□□ -1.83
CASC4-206ENST00000558847 ACY1Q03154 408 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 ZP4Q12836 540 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 OVGP1Q12889 678 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 CD226Q15762 336 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 CYBRD1Q53TN4 286 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 BEND6Q5SZJ8 279 aaPredicted RBP3.61□□□□□ -1.83
CASC4-206ENST00000558847 DOK6Q6PKX4 331 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 APOOLQ6UXV4 268 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 LPCAT2Q7L5N7 544 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 RPAINQ86UA6 219 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 CBWD2Q8IUF1 395 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 DENND6BQ8NEG7 585 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 VPS39Q96JC1 886 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 ELMO2Q96JJ3 720 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 ZNF597Q96LX8 424 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 RBM4BQ9BQ04 359 aaKnown RBP3.61□□□□□ -1.83
CASC4-206ENST00000558847 TBCDQ9BTW9 1192 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 ST6GALNAC5Q9BVH7 336 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 MRPL13Q9BYD1 178 aaKnown RBP3.61□□□□□ -1.83
CASC4-206ENST00000558847 TRIM9Q9C026 710 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 LIME1Q9H400 295 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 AMBNQ9NP70 447 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 TAS2R16Q9NYV7 291 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 LAMP5Q9UJQ1 280 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 MRPS7Q9Y2R9 242 aaKnown RBP3.61□□□□□ -1.83
CASC4-206ENST00000558847 PRSS21Q9Y6M0 314 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 GRIN2DO15399 1336 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 CARMIL1Q5VZK9 1371 aa3.61□□□□□ -1.83
CASC4-206ENST00000558847 TRBV7-9A0A0J9YWB2 115 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 A0A0U1RQV5 110 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 CLDN5O00501 218 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 IGSF6O95976 241 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 CCDC159P0C7I6 412 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 HSPA5P11021 654 aaKnown RBP3.6□□□□□ -1.83
CASC4-206ENST00000558847 PTPN4P29074 926 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 RPL34P49207 117 aaKnown RBP3.6□□□□□ -1.83
CASC4-206ENST00000558847 MS4A2Q01362 244 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 EXOSC2Q13868 293 aaKnown RBP3.6□□□□□ -1.83
CASC4-206ENST00000558847 SIX1Q15475 284 aaPredicted RBP3.6□□□□□ -1.83
CASC4-206ENST00000558847 TATDN3Q17R31 274 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 MRGPRG-AS1Q2M3A8 158 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 CNPY1Q3B7I2 92 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 LINC00242Q5T6M2 205 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 ARMCX5Q6P1M9 558 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 EMBQ6PCB8 327 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 ZNF562Q6V9R5 426 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 STXBP4Q6ZWJ1 553 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 CCDC71Q8IV32 467 aaPredicted RBP3.6□□□□□ -1.83
CASC4-206ENST00000558847 HSCBQ8IWL3 235 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 C4orf32Q8N8J7 132 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 STKLD1Q8NE28 680 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 GMCL1P1Q8NEA9 526 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 OR5AU1Q8NGC0 362 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 OR52J3Q8NH60 311 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 MIPOL1Q8TD10 442 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 MCHR2Q969V1 340 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 TRIM44Q96DX7 344 aaPredicted RBP3.6□□□□□ -1.83
CASC4-206ENST00000558847 HPDLQ96IR7 371 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 FEM1AQ9BSK4 669 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 TRIM15Q9C019 465 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 PNNQ9H307 717 aaKnown RBP3.6□□□□□ -1.83
CASC4-206ENST00000558847 TSPY26PQ9H489 355 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 DUS2Q9NX74 493 aaKnown RBP3.6□□□□□ -1.83
CASC4-206ENST00000558847 AATFQ9NY61 560 aaKnown RBP eCLIP3.6□□□□□ -1.83
CASC4-206ENST00000558847 RDH8Q9NYR8 311 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms