RNA–Protein interactions for RNA: ENST00000558602.5

IDH3A-208, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 2

Gene IDH3A, Length 2,217 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-208	ENST00000558602	KCNJ5	P48544	419 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	C21orf59	P57076	290 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	MAT1A	Q00266	395 aa	Known RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	MGAT2	Q10469	447 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	APOF	Q13790	326 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ERV3-1	Q14264	604 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	GANAB	Q14697	944 aa	Known RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	CNPY1	Q3B7I2	92 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	IFI44L	Q53G44	452 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	WDR45B	Q5MNZ6	344 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	MANEA	Q5SRI9	462 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	FHL5	Q5TD97	284 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	PRAMEF17	Q5VTA0	474 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	PMS2CL	Q68D20	193 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	KDM4D	Q6B0I6	523 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	LAIR2	Q6ISS4	152 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	KRT80	Q6KB66	452 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	BRICD5	Q6PL45	260 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	KANSL1	Q7Z3B3	1105 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	PATL1	Q86TB9	770 aa	Known RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	THNSL2	Q86YJ6	484 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	LRRC25	Q8N386	305 aa	Predicted RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	OR52J3	Q8NH60	311 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	SFXN5	Q8TD22	340 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	RNF31	Q96EP0	1072 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ZNF285	Q96NJ3	590 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	COL21A1	Q96P44	957 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	RBM4B	Q9BQ04	359 aa	Known RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	CCDC3	Q9BQI4	270 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	RBM4	Q9BWF3	364 aa	Known RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ROGDI	Q9GZN7	287 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	FAM192A	Q9GZU8	254 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	SPRTN	Q9H040	489 aa	Predicted RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	GABARAPL1	Q9H0R8	117 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	SLC38A1	Q9H2H9	487 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	LYRM4	Q9HD34	91 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	C8orf4	Q9NR00	106 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ACER3	Q9NUN7	267 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	RLIM	Q9NVW2	624 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	THUMPD1	Q9NXG2	353 aa	Known RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	PDP1	Q9P0J1	537 aa	Predicted RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	NTM	Q9P121	344 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	HCN3	Q9P1Z3	774 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	RHCG	Q9UBD6	479 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	PHF11	Q9UIL8	331 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	FOXD3	Q9UJU5	478 aa	Predicted RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ANGPT4	Q9Y264	503 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	SAMHD1	Q9Y3Z3	626 aa	Known RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	CHST2	Q9Y4C5	530 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	PCDHGA8	Q9Y5G5	932 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	CLDN16	Q9Y5I7	305 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	GPC6	Q9Y625	555 aa	Predicted RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ZNF780B	Q9Y6R6	833 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	CHD6	Q8TD26	2715 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	TRIM64	A6NGJ6	449 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602		H0YAE9	185 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	FCMR	O60667	390 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	DPM1	O60762	260 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	JRK	O75564	520 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	CDC123	O75794	336 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	TNFAIP8	O95379	198 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	H6PD	O95479	791 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	HPR	P00739	348 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	FH	P07954	510 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	NR2F1	P10589	423 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	POR	P16435	677 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	DDX5	P17844	614 aa	Known RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	HOXA6	P31267	233 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	HOXD12	P35452	270 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	LIMS1	P48059	325 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	PPM1F	P49593	454 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	CLK3	P49761	638 aa	Known RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	SEPHS1	P49903	392 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	BTG2	P78543	158 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	CHRNE	Q04844	493 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	EXOSC7	Q15024	291 aa	Known RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	PRICKLE4	Q2TBC4	344 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	CTU2	Q2VPK5	515 aa	Known RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	AMZ1	Q400G9	498 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	ZNF628	Q5EBL2	1059 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	LAIR1	Q6GTX8	287 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	TCTN3	Q6NUS6	607 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	KLHL35	Q6PF15	583 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	C16orf87	Q6PH81	154 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602		Q6ZPB1	254 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	TMPRSS9	Q7Z410	1059 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	ZNF605	Q86T29	641 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	ZNF554	Q86TJ5	538 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	SATL1	Q86VE3	508 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	HIPK1	Q86Z02	1210 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	ARMC8	Q8IUR7	673 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	IQCF2	Q8IXL9	164 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	OR2L13	Q8N349	312 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	ZNF786	Q8N393	782 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	METTL27	Q8N6F8	245 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602		Q8N9G6	341 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	OR4C15	Q8NGM1	316 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	OR2I1P	Q8NGU4	316 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms