RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 IL3P08700 152 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 GP1BBP13224 206 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 PRPH2P23942 346 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 HPCAL1P37235 193 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 SOX3P41225 446 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 UQCRFS1P47985 274 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 MASP1P48740 699 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 CLK3P49761 638 aaKnown RBP8.01□□□□□ -1.13
USP3-208ENST00000558285 SLC18A1P54219 525 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 C2orf80Q0P641 193 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 FUT7Q11130 342 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 RPS6KA2Q15349 733 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 VPS26BQ4G0F5 336 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 ATP6AP1LQ52LC2 224 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 PDCD4Q53EL6 469 aaKnown RBP8.01□□□□□ -1.13
USP3-208ENST00000558285 TMEM198Q66K66 360 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 ZNF324BQ6AW86 544 aaPredicted RBP8.01□□□□□ -1.13
USP3-208ENST00000558285 TMEM211Q6ICI0 200 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 SH2D5Q6ZV89 423 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 SPATA24Q86W54 205 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 SULF2Q8IWU5 870 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 LIX1Q8N485 282 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 ZFP62Q8NB50 900 aaPredicted RBP8.01□□□□□ -1.13
USP3-208ENST00000558285 ZNF675Q8TD23 568 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 TCP10LQ8TDR4 215 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 C16orf78Q8WTQ4 265 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 TM4SF18Q96CE8 201 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 TMCO6Q96DC7 493 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 DGCR14Q96DF8 476 aaKnown RBP8.01□□□□□ -1.13
USP3-208ENST00000558285 MTERF3Q96E29 417 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 LRRC37BQ96QE4 947 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 TAAR6Q96RI8 345 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 EXO5Q9H790 373 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 IL1RL2Q9HB29 575 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 KCNK9Q9NPC2 374 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 MYNNQ9NPC7 610 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 SLC35C2Q9NQQ7 365 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 ATAD3AQ9NVI7 634 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 FGFR1OP2Q9NVK5 253 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 QPCTLQ9NXS2 382 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 CLDN16Q9Y5I7 305 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 MYO18BQ8IUG5 2567 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 PCSK5Q92824 1860 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 CFAP46Q8IYW2 2715 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 CNTRLQ7Z7A1 2325 aa8.01□□□□□ -1.13
USP3-208ENST00000558285 CLEC18AA5D8T8 446 aa8□□□□□ -1.13
USP3-208ENST00000558285 OR14I1A6ND48 311 aa8□□□□□ -1.13
USP3-208ENST00000558285 TGFBR3LH3BV60 316 aa8□□□□□ -1.13
USP3-208ENST00000558285 PPP6CO00743 305 aa8□□□□□ -1.13
USP3-208ENST00000558285 BCKDKO14874 412 aa8□□□□□ -1.13
USP3-208ENST00000558285 LRRTM2O43300 516 aa8□□□□□ -1.13
USP3-208ENST00000558285 LYPLA1O75608 230 aaPredicted RBP8□□□□□ -1.13
USP3-208ENST00000558285 OR6B1O95007 311 aa8□□□□□ -1.13
USP3-208ENST00000558285 IFI6P09912 130 aa8□□□□□ -1.13
USP3-208ENST00000558285 FEN1P39748 380 aaKnown RBP8□□□□□ -1.13
USP3-208ENST00000558285 SLC37A1P57057 533 aa8□□□□□ -1.13
USP3-208ENST00000558285 PPIAP62937 165 aaKnown RBP8□□□□□ -1.13
USP3-208ENST00000558285 HMGCS1Q01581 520 aa8□□□□□ -1.13
USP3-208ENST00000558285 DCTN2Q13561 401 aaKnown RBP8□□□□□ -1.13
USP3-208ENST00000558285 EFR3AQ14156 821 aa8□□□□□ -1.13
USP3-208ENST00000558285 PCLAFQ15004 111 aa8□□□□□ -1.13
USP3-208ENST00000558285 EBPQ15125 230 aaKnown RBP8□□□□□ -1.13
USP3-208ENST00000558285 SCIMPQ6UWF3 145 aa8□□□□□ -1.13
USP3-208ENST00000558285 CLEC18BQ6UXF7 455 aa8□□□□□ -1.13
USP3-208ENST00000558285 B3GNT6Q6ZMB0 384 aa8□□□□□ -1.13
USP3-208ENST00000558285 ACAD11Q709F0 780 aa8□□□□□ -1.13
USP3-208ENST00000558285 RPS27LQ71UM5 84 aaKnown RBP8□□□□□ -1.13
USP3-208ENST00000558285 FBXW8Q8N3Y1 598 aa8□□□□□ -1.13
USP3-208ENST00000558285 FAM109AQ8N4B1 249 aa8□□□□□ -1.13
USP3-208ENST00000558285 CLEC18CQ8NCF0 446 aa8□□□□□ -1.13
USP3-208ENST00000558285 C16orf52Q8NHV5 167 aa8□□□□□ -1.13
USP3-208ENST00000558285 STMN2Q93045 179 aa8□□□□□ -1.13
USP3-208ENST00000558285 RELTQ969Z4 430 aa8□□□□□ -1.13
USP3-208ENST00000558285 EXOSC8Q96B26 276 aaKnown RBP8□□□□□ -1.13
USP3-208ENST00000558285 SARAFQ96BY9 339 aa8□□□□□ -1.13
USP3-208ENST00000558285 ZBED6CLQ96FA7 236 aaPredicted RBP8□□□□□ -1.13
USP3-208ENST00000558285 ZNF764Q96H86 408 aaPredicted RBP8□□□□□ -1.13
USP3-208ENST00000558285 LCORQ96JN0 433 aaPredicted RBP8□□□□□ -1.13
USP3-208ENST00000558285 ZNF597Q96LX8 424 aa8□□□□□ -1.13
USP3-208ENST00000558285 HBEGFQ99075 208 aa8□□□□□ -1.13
USP3-208ENST00000558285 GATA5Q9BWX5 397 aaPredicted RBP8□□□□□ -1.13
USP3-208ENST00000558285 LDAHQ9H6V9 325 aa8□□□□□ -1.13
USP3-208ENST00000558285 COQ3Q9NZJ6 369 aa8□□□□□ -1.13
USP3-208ENST00000558285 EIF3LQ9Y262 564 aaKnown RBP8□□□□□ -1.13
USP3-208ENST00000558285 NTNG1Q9Y2I2 539 aa8□□□□□ -1.13
USP3-208ENST00000558285 FIS1Q9Y3D6 152 aa8□□□□□ -1.13
USP3-208ENST00000558285 TRAF6Q9Y4K3 522 aa8□□□□□ -1.13
USP3-208ENST00000558285 SCN2AQ99250 2005 aa8□□□□□ -1.13
USP3-208ENST00000558285 KALRNO60229 2985 aa8□□□□□ -1.13
USP3-208ENST00000558285 DOCK10Q96BY6 2186 aa8□□□□□ -1.13
USP3-208ENST00000558285 FIGNL2A6NMB9 653 aa8□□□□□ -1.13
USP3-208ENST00000558285 NPIPB8E9PQR5 432 aa8□□□□□ -1.13
USP3-208ENST00000558285 CCL21O00585 134 aa8□□□□□ -1.13
USP3-208ENST00000558285 PGRMC2O15173 223 aa8□□□□□ -1.13
USP3-208ENST00000558285 HNRNPRO43390 633 aaKnown RBP8□□□□□ -1.13
USP3-208ENST00000558285 CDC40O60508 579 aaKnown RBP eCLIP8□□□□□ -1.13
USP3-208ENST00000558285 CCDC22O60826 627 aa8□□□□□ -1.13
USP3-208ENST00000558285 SPAG7O75391 227 aa8□□□□□ -1.13
USP3-208ENST00000558285 SERPINE1P05121 402 aa8□□□□□ -1.13
USP3-208ENST00000558285 BPGMP07738 259 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms