RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 SSR4P51571 173 aa19.67■□□□□ 0.74
CASC4-204ENST00000557945 GTDC1Q4AE62 458 aa19.67■□□□□ 0.74
CASC4-204ENST00000557945 TREML1Q86YW5 311 aa19.67■□□□□ 0.74
CASC4-204ENST00000557945 SLC44A2Q8IWA5 706 aaPredicted RBP19.67■□□□□ 0.74
CASC4-204ENST00000557945 TMEM156Q8N614 296 aa19.67■□□□□ 0.74
CASC4-204ENST00000557945 CDRT4Q8N9R6 151 aa19.67■□□□□ 0.74
CASC4-204ENST00000557945 SLC9A6Q92581 669 aa19.67■□□□□ 0.74
CASC4-204ENST00000557945 OTUB1Q96FW1 271 aaPredicted RBP19.67■□□□□ 0.74
CASC4-204ENST00000557945 SLC35G5Q96KT7 338 aa19.67■□□□□ 0.74
CASC4-204ENST00000557945 BTBD9Q96Q07 612 aa19.67■□□□□ 0.74
CASC4-204ENST00000557945 RASL10BQ96S79 203 aa19.67■□□□□ 0.74
CASC4-204ENST00000557945 PAIP1Q9H074 479 aaKnown RBP19.67■□□□□ 0.74
CASC4-204ENST00000557945 ADNPQ9H2P0 1102 aa19.67■□□□□ 0.74
CASC4-204ENST00000557945 GPATCH2Q9NW75 528 aa19.67■□□□□ 0.74
CASC4-204ENST00000557945 GPR55Q9Y2T6 319 aaPredicted RBP19.67■□□□□ 0.74
CASC4-204ENST00000557945 ZNF451Q9Y4E5 1061 aa19.67■□□□□ 0.74
CASC4-204ENST00000557945 FRG2CA6NGY1 282 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 BBIP1A8MTZ0 92 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 ERVH48-1M5A8F1 160 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 WDPCPO95876 746 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 ZCCHC18P0CG32 403 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 DRD5P21918 477 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 GABRA3P34903 492 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 CASP9P55211 416 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 NRG3P56975 720 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 RPS26P62854 115 aaKnown RBP19.66■□□□□ 0.74
CASC4-204ENST00000557945 OC90Q02509 493 aaPredicted RBP19.66■□□□□ 0.74
CASC4-204ENST00000557945 STX5Q13190 355 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 NFYCQ13952 458 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 ZCCHC12Q6PEW1 402 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 RETREG3Q86VR2 466 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 C17orf47Q8NEP4 570 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 RP9Q8TA86 221 aaKnown RBP19.66■□□□□ 0.74
CASC4-204ENST00000557945 C9orf43Q8TAL5 461 aaPredicted RBP19.66■□□□□ 0.74
CASC4-204ENST00000557945 ASB15Q8WXK1 588 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 TM9SF4Q92544 642 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 ACTRT3Q9BYD9 372 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 IL1RL2Q9HB29 575 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 ANKRD10Q9NXR5 420 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 SLAMF8Q9P0V8 285 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 TP53TG5Q9Y2B4 290 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 OR10H1Q9Y4A9 318 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 PCDHB14Q9Y5E9 798 aa19.66■□□□□ 0.74
CASC4-204ENST00000557945 K7EM74 188 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 FBP2O00757 339 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 NADKO95544 446 aaPredicted RBP19.65■□□□□ 0.74
CASC4-204ENST00000557945 PDGFAP04085 211 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 KRT16P08779 473 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 ALOX5P09917 674 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 CT45A8P0DMV1 189 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 CT45A9P0DMV2 189 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 ACP2P11117 423 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 COX4I1P13073 169 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 MATN1P21941 496 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 CASRP41180 1078 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 ARG2P78540 354 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 PSG6Q00889 435 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 CT45A2Q5DJT8 189 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 SAXO2Q658L1 398 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 REP15Q6BDI9 236 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 NPSR1Q6W5P4 371 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 DHDDSQ86SQ9 333 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 PRR22Q8IZ63 422 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 PNPT1Q8TCS8 783 aaKnown RBP19.65■□□□□ 0.74
CASC4-204ENST00000557945 GPR151Q8TDV0 419 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 NEURL3Q96EH8 262 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 PHF12Q96QT6 1004 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 UTP23Q9BRU9 249 aaKnown RBP19.65■□□□□ 0.74
CASC4-204ENST00000557945 LMF2Q9BU23 707 aaKnown RBP19.65■□□□□ 0.74
CASC4-204ENST00000557945 Q9N2J8 555 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 ZNF71Q9NQZ8 489 aaPredicted RBP19.65■□□□□ 0.74
CASC4-204ENST00000557945 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.65■□□□□ 0.74
CASC4-204ENST00000557945 TUBD1Q9UJT1 453 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 LHX6Q9UPM6 363 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 PCDHGB7Q9Y5F8 929 aa19.65■□□□□ 0.74
CASC4-204ENST00000557945 TTC36A6NLP5 189 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 CAPN14A8MX76 684 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 MRASO14807 208 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 ACOX3O15254 700 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 ZNF354AO60765 605 aaPredicted RBP19.64■□□□□ 0.73
CASC4-204ENST00000557945 OR6B1O95007 311 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 KRT75O95678 551 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 C1QCP02747 245 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 PTPN6P29350 595 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 SOX3P41225 446 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 DUSP5Q16690 384 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 LRIF1Q5T3J3 769 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 ZNF468Q5VIY5 522 aaPredicted RBP19.64■□□□□ 0.73
CASC4-204ENST00000557945 CDC73Q6P1J9 531 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 OPN5Q6U736 354 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 ASB18Q6ZVZ8 466 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 RNF130Q86XS8 419 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 ZADH2Q8N4Q0 377 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 DPP10Q8N608 796 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 SLC15A4Q8N697 577 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 EXD3Q8N9H8 876 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 SLC16A11Q8NCK7 471 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 DNAJB8Q8NHS0 232 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 ADAMTS15Q8TE58 950 aa19.64■□□□□ 0.73
CASC4-204ENST00000557945 ZFP90Q8TF47 636 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms