RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 RNF103-CHMP3A0A140T963 221 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 TMEM200CA6NKL6 621 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 A6NL46 340 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 NDUFAB1O14561 156 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 KCNH1O95259 989 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 ANP32DO95626 131 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 CPSF4O95639 269 aaKnown RBP13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 AK1P00568 194 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 CELA2AP08217 269 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 MAP3K8P41279 467 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 CYB561P49447 251 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 HLCSP50747 726 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 CYLC2Q14093 348 aaPredicted RBP13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 TLR1Q15399 786 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 LACTB2Q53H82 288 aaPredicted RBP13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 EXOSC6Q5RKV6 272 aaKnown RBP13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 C6orf10Q5SRN2 563 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 MFSD12Q6NUT3 480 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 CDC73Q6P1J9 531 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 MTDHQ86UE4 582 aaKnown RBP13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 ANKRD46Q86W74 232 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 CLECL1Q8IZS7 167 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 TMEM156Q8N614 296 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 ZNF321PQ8N8H1 164 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 GOLM1Q8NBJ4 401 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 BCAS4Q8TDM0 211 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 OIT3Q8WWZ8 545 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 VPS33AQ96AX1 596 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 GIMAP5Q96F15 307 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 ABHD17AQ96GS6 310 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 GAL3ST4Q96RP7 486 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 RASL10BQ96S79 203 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 SECISBP2Q96T21 854 aaKnown RBP13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 UTP23Q9BRU9 249 aaKnown RBP13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 EML6Q6ZMW3 1958 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 NINQ8N4C6 2090 aa13.06□□□□□ -0.32
SUPT16H-208ENST00000557652 LOC400499M0QZD8 3231 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 KMT2BQ9UMN6 2715 aaPredicted RBP13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 LAMA5O15230 3695 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 OR5H15A6NDH6 313 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 NKX2-2O95096 273 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 HMGN2P05204 90 aaKnown RBP13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 ABCB1P08183 1280 aaPredicted RBP13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 GUSBP08236 651 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 ALOX5P09917 674 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 CT45A8P0DMV1 189 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 CT45A9P0DMV2 189 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 CAPN3P20807 821 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 SOAT1P35610 550 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 CHI3L1P36222 383 aaPredicted RBP13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 PSG6Q00889 435 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 ZNF155Q12901 538 aaPredicted RBP13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 FADDQ13158 208 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 DUSP8Q13202 625 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 CT45A2Q5DJT8 189 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 SAXO2Q658L1 398 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 B3GNTL1Q67FW5 361 aaPredicted RBP13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 TMEM81Q6P7N7 255 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 ZNF621Q6ZSS3 439 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 C6orf120Q7Z4R8 191 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 SLC34A3Q8N130 599 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 ASB15Q8WXK1 588 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 SH3GL1Q99961 368 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 SLC35A5Q9BS91 424 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 CCDC106Q9BWC9 280 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 ITPAQ9BY32 194 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 TRIM4Q9C037 500 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 SLC25A18Q9H1K4 315 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 PIGUQ9H490 435 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 GPATCH2Q9NW75 528 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 AP3M1Q9Y2T2 418 aa13.05□□□□□ -0.32
SUPT16H-208ENST00000557652 TRAV17A0A0B4J275 112 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 A8MVJ9 347 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 TP53I11O14683 189 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 PRKNO60260 465 aaPredicted RBP13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 OR2J2O76002 312 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 FBXO45P0C2W1 286 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 PTPN6P29350 595 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 KRT20P35900 424 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 NR0B1P51843 470 aaKnown RBP13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 MNAT1P51948 309 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 PNLIPRP2P54317 469 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 ARG2P78540 354 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 EFR3AQ14156 821 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 UBAP2LQ14157 1087 aaKnown RBP13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 NTRK2Q16620 822 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 DECR1Q16698 335 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 MMEL1Q495T6 779 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 GK5Q6ZS86 529 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 SZRD1Q7Z422 152 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 BEST3Q8N1M1 668 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 ADAMTS15Q8TE58 950 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 ZFP90Q8TF47 636 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 NUDT8Q8WV74 236 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 PMM1Q92871 262 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 TMEM125Q96AQ2 219 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 ROPN1LQ96C74 230 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 SPACA9Q96E40 222 aaPredicted RBP13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 CRELD1Q96HD1 420 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 SLC35G5Q96KT7 338 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms