RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CHEK1O14757 476 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ALOX15BO15296 676 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 EIF3HO15372 352 aaKnown RBP eCLIP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 P2RX6O15547 441 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 VEGFDO43915 354 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 PEX11AO75192 247 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SAP30O75446 220 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 TOM1L1O75674 476 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 RHBDL1O75783 438 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 BCAS2O75934 225 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 GLCEO94923 617 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 NXPH4O95158 308 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 NSA2O95478 260 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 NGFP01138 241 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 IFNB1P01574 187 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CXCL10P02778 98 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 HMOX1P09601 288 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ANKRD34CP0C6C1 535 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CALM1P0DP23 149 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CALM2P0DP24 149 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CALM3P0DP25 149 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SYT1P21579 422 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 PTPN6P29350 595 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 HOXA9P31269 272 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CDH5P33151 784 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 BLVRAP53004 296 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ATXN3P54252 364 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 PRRX1P54821 245 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 MTTPP55157 894 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 DCDC1P59894 354 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ARF5P84085 180 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ELP6Q0PNE2 266 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 DYNC1I2Q13409 638 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CASP8Q14790 479 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF876PQ49A33 203 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SLC25A53Q5H9E4 307 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 BEND3Q5T5X7 828 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 LRRC38Q5VT99 294 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ADNP2Q6IQ32 1131 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 KIAA1328Q86T90 577 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 EID3Q8N140 333 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 TEX26Q8N6G2 289 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF383Q8NA42 475 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 OR10G7Q8NGN6 311 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SLC2A14Q8TDB8 520 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 PAQR8Q8TEZ7 354 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SEPT8Q92599 483 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 TOP1MTQ969P6 601 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CCDC127Q96BQ5 260 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SERAC1Q96JX3 654 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 RPGRIP1Q96KN7 1286 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 LRR1Q96L50 414 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 RANBP9Q96S59 729 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 OPRPNQ99935 248 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 RBM4BQ9BQ04 359 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 PRRG4Q9BZD6 226 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 BARHL1Q9BZE3 327 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 NAPBQ9H115 298 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 DPH5Q9H2P9 285 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 DPEP3Q9H4B8 488 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ASB8Q9H765 288 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 PPANQ9NQ55 473 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 NDE1Q9NXR1 346 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 DIMT1Q9UNQ2 313 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 EIF3LQ9Y262 564 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 AP3M1Q9Y2T2 418 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ZHX2Q9Y6X8 837 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 TNRQ92752 1358 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 RAB3GAP2Q9H2M9 1393 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CEP152O94986 1710 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CLIP1P30622 1438 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 A0A087WYN8 130 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 A0A087WZ39 114 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 A0A1W2PPR1 153 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CTAGE15A4D2H0 777 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF233A6NK53 670 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TMEM114B3SHH9 223 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 K7EQD1 137 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 M0R296 226 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 PSMD11O00231 422 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 DCXO43602 365 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TLX2O43763 284 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 NUDT21O43809 227 aaKnown RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CYTIPO60759 359 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 PFKFB2O60825 505 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ATP9AO75110 1047 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 IDH1O75874 414 aaKnown RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 IGHG1P01857 330 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 RPS17P08708 135 aaKnown RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ZCCHC18P0CG32 403 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TPBGLP0DKB5 382 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CCND3P30281 292 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ACTR1BP42025 376 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 GDI2P50395 445 aaKnown RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 P2RY4P51582 365 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 LUMP51884 338 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CDR2Q01850 454 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 FCN2Q15485 313 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ZBTB6Q15916 424 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ZSWIM7Q19AV6 140 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms