RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 LCP2Q13094 533 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 RCAN2Q14206 197 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 ACSF3Q4G176 576 aaPredicted RBP9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 CFAP157Q5JU67 520 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 SH2D4BQ5SQS7 431 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 FBXW10Q5XX13 1052 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 TIGD3Q6B0B8 471 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 LACC1Q8IV20 430 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 ZZZ3Q8IYH5 903 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 SAMD14Q8IZD0 417 aaPredicted RBP9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 FAM9CQ8IZT9 166 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 ACBD4Q8NC06 268 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 FAM83FQ8NEG4 500 aaPredicted RBP9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 OR9A2Q8NGT5 310 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 C16orf78Q8WTQ4 265 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 HGDQ93099 445 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 TMBIM1Q969X1 311 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 CCDC126Q96EE4 140 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 L3HYPDHQ96EM0 354 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 ZNF681Q96N22 645 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 COL21A1Q96P44 957 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 TREX2Q9BQ50 279 aaPredicted RBP9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 UGT2B28Q9BY64 529 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 EPB41L4BQ9H329 900 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 MIEF1Q9NQG6 463 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 ZNF639Q9UID6 485 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 OR10H1Q9Y4A9 318 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 ITPR2Q14571 2701 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 PKDREJQ9NTG1 2253 aa9.66□□□□□ -0.86
SPTLC2-205ENST00000556607 PRAMEF25A6NGN4 478 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 KDM4EB2RXH2 506 aaPredicted RBP9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 EEF1E1-BLOC1S5C9J1V9 151 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 H0Y3Z8 333 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 SNPHO15079 494 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 EEF1E1O43324 174 aaKnown RBP9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 NME6O75414 186 aaPredicted RBP9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 ERN1O75460 977 aaKnown RBP9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 CBR3O75828 277 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 CYP4B1P13584 511 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 TCEA1P23193 301 aaKnown RBP9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 SLCO1A2P46721 670 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 EMDP50402 254 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 RAE1P78406 368 aaKnown RBP9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 SNTA1Q13424 505 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 ZNF628Q5EBL2 1059 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 FNDC7Q5VTL7 733 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 VASNQ6EMK4 673 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 OR5M10Q6IEU7 315 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 ENPP6Q6UWR7 440 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 SEM1Q6ZVN7 128 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 LARP4Q71RC2 724 aaKnown RBP eCLIP9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 SLC44A2Q8IWA5 706 aaPredicted RBP9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 NAXEQ8NCW5 288 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 CTHRC1Q96CG8 243 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 DTNBP1Q96EV8 351 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 ADOQ96SZ5 270 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 POLDIP3Q9BY77 421 aaKnown RBP9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 SHCBP1LQ9BZQ2 653 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 UBQLN3Q9H347 655 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 SERHLQ9NQF3 203 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 SLC35C2Q9NQQ7 365 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 DNAJB12Q9NXW2 375 aaKnown RBP9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 TAS2R9Q9NYW1 312 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 DKKL1Q9UK85 242 aa9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 EXO1Q9UQ84 846 aaKnown RBP9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 POLR3HQ9Y535 204 aaPredicted RBP9.65□□□□□ -0.86
SPTLC2-205ENST00000556607 KIAA1549Q9HCM3 1950 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 INTS1Q8N201 2190 aaKnown RBP9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 CREBBPQ92793 2442 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 ABCB7O75027 752 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 ACTL6AO96019 429 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 JUNP05412 331 aaKnown RBP9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 TIMP3P35625 211 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 PEX19P40855 299 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 PTGDSP41222 190 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 GSTM5P46439 218 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 RFX3P48380 749 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 CCT5P48643 541 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 ASCL1P50553 236 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 NCBP2P52298 156 aaKnown RBP eCLIP9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 DGKQP52824 942 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 NAGLUP54802 743 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 FOXA1P55317 472 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 DLX5P56178 289 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 CORO7P57737 925 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 ZNF763Q0D2J5 394 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 ZNF155Q12901 538 aaPredicted RBP9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 EFR3AQ14156 821 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 CCDC153Q494R4 210 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 DCST1Q5T197 706 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 NSUN5P2Q63ZY6 315 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 ZYG11AQ6WRX3 759 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 CHMP1BQ7LBR1 199 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 IFNEQ86WN2 208 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 CNPY4Q8N129 248 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 RELL2Q8NC24 303 aaPredicted RBP9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 ZNF675Q8TD23 568 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 NRGNQ92686 78 aa9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 EFHD2Q96C19 240 aaPredicted RBP9.64□□□□□ -0.87
SPTLC2-205ENST00000556607 WDYHV1Q96HA8 205 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms