RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288	OR7G3	Q8NG95	312 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	METTL6	Q8TCB7	284 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	NT5C	Q8TCD5	201 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	ACMSD	Q8TDX5	336 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	DOK4	Q8TEW6	326 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	AEN	Q8WTP8	325 aa	Known RBP	4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	FKBP10	Q96AY3	582 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	REPS1	Q96D71	796 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	CMTM7	Q96FZ5	175 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	CNDP1	Q96KN2	507 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	IP6K3	Q96PC2	410 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	BBC3	Q96PG8	261 aa	Predicted RBP	4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	SMC6	Q96SB8	1091 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	CENPK	Q9BS16	269 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	EFCAB11	Q9BUY7	163 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	CNPPD1	Q9BV87	410 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	SORBS1	Q9BX66	1292 aa	Known RBP	4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	FUT8	Q9BYC5	575 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	TXLNGY	Q9BZA5	131 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	SEMA4C	Q9C0C4	833 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	ELOVL6	Q9H5J4	265 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	NT5DC2	Q9H857	520 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	KCNK13	Q9HB14	408 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	MID1IP1	Q9NPA3	183 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	MRPS18A	Q9NVS2	196 aa	Known RBP	4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	LUZP4	Q9P127	313 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	FBXL4	Q9UKA2	621 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	NXT1	Q9UKK6	140 aa	Known RBP	4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	TP53TG5	Q9Y2B4	290 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	KLK4	Q9Y5K2	254 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	SLC22A7	Q9Y694	548 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	SPACA6	W5XKT8	324 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	EXPH5	Q8NEV8	1989 aa		4.36	□□□□□ -1.71
ATXN3-238	ENST00000556288	MGA	Q8IWI9	3026 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	UQCRHL	A0A096LP55	91 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288		A0A1W2PPL8	197 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288		A0A1W2PS29	197 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	GOLGA6L10	A6NI86	522 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	GLOD5	A6NK44	160 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288		A8MT66	165 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	MAGEB17	A8MXT2	336 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288		K7EM74	188 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	PPP6C	O00743	305 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	OR7A17	O14581	309 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	CTIF	O43310	598 aa	Known RBP	4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	SLC28A2	O43868	658 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	GALR3	O60755	368 aa	Predicted RBP	4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	OTC	P00480	354 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	PDYN	P01213	254 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	SLPI	P03973	132 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	GBA	P04062	536 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	KLK1	P06870	262 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	TUBB	P07437	444 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	FH	P07954	510 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	HKR1	P10072	659 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	EGR2	P11161	476 aa	Predicted RBP	4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	CD22	P20273	847 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	MAOA	P21397	527 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	JAK1	P23458	1154 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	MMP11	P24347	488 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	ATP5F1	P24539	256 aa	Predicted RBP	4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	CERS1	P27544	350 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	SERPINB3	P29508	390 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	TLX1	P31314	330 aa	Predicted RBP	4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	SSR2	P43308	183 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	ANXA11	P50995	505 aa	Known RBP	4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	NAGLU	P54802	743 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	MTTP	P55157	894 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	HERVK_113	P63132	956 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	ID2	Q02363	134 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	AIMP2	Q13155	320 aa	Known RBP	4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	ABRAXAS2	Q15018	415 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	IMPG1	Q17R60	797 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	BTBD16	Q32M84	506 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	CCDC153	Q494R4	210 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	UNC50	Q53HI1	259 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	SFT2D3	Q587I9	215 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	DCAF10	Q5QP82	559 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	CCNYL2	Q5T2Q4	361 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	AGAP7P	Q5VUJ5	663 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	FCRLB	Q6BAA4	426 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	SP5	Q6BEB4	398 aa	Predicted RBP	4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	GRHL2	Q6ISB3	625 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	PPP4R4	Q6NUP7	873 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	NIPAL1	Q6NVV3	410 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	KIRREL2	Q6UWL6	708 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	LANCL3	Q6ZV70	420 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	GPRIN3	Q6ZVF9	776 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	CPEB2	Q7Z5Q1	589 aa	Known RBP	4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	SLC22A9	Q8IVM8	553 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	OR4N5	Q8IXE1	308 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	CA13	Q8N1Q1	262 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	GALNT16	Q8N428	558 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	ZADH2	Q8N4Q0	377 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	AMER2	Q8N7J2	671 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	AMER3	Q8N944	861 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	ACOT4	Q8N9L9	421 aa		4.35	□□□□□ -1.71
ATXN3-238	ENST00000556288	FAM47B	Q8NA70	645 aa		4.35	□□□□□ -1.71

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